Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1093 |
Symbol | uvrC |
ID | 5410018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 1087137 |
End bp | 1088690 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640868319 |
Product | excinuclease ABC subunit C |
Protein accession | YP_001404254 |
Protein GI | 154150636 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.295686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGATA CCGCAGGCCT TCCCGAGAAC CCCGGCTGCT ACCTCTATTC AGATGCGGAC GGGAGGATCA TCTATGTGGG AAAGGCAAAG AACCTCAAAA AGCGGGTATC GAGCTATTTC ACAAAAAAGG ATCACGACCC CAAGACCCGG AGCCTGGTTG CCCATATCGC CTCGGTGGAT TTCGTTGTCA CCGGCACGGA GACCGAGGCT TTCCTTCTCG AAAACACACT CATCAAAAAG CACCAGCCCA AGTACAACAT CGATCTCAAG GACGCCAAGC GCTATGCCTG GATCGAGCTC ACCCGGGAAG AGTTCCCGCG CCTGGTGATC GCCCGGCGGG CAACGGATGA TGGCACATTT TTTGGGCCGT TTGTCTCTGC GGCCGAACGG GACCGGGTGC TTGCCGTGGC AAAAAAAGTC TTCCATCTGC GGACCTGCAA AAAACTCCCC AAGCGCCCCT GCCTCCGGCG CCACATGCAG TCCTGCAGCG CTCCCTGCAC GGGAAAGGTA AGCCCGGCAG AGTATGATGA GAACGTAAAA AAGGCAGCCC TGCTCCTGAA GGGGAAGTCC ACCGAGCTGC TCGATGAGCT CAGGCACGAG ATGGCAGAAC GGGCATCCCG TGAGGAGTAC GAGCGGGCGC TCGTACTGAG AAACGAGATT AACGCAATCG GGCACCTTGC GGACCGGCAG CATGTGGAGA GGCGGCGGGA GTACGATCAG GATGTGATCG CGTACCAGGT AACGGACGGG AAGGCATACC TCACCGTGTT CAATGTGGAA CGGGGAACGC TTGCAAACAA GGAGGAGTTC ACCTTTGAAG CCGGCGAAGA TATCCTTGAA GAGTTTCTCG TTCAGTACTA CTCGGATCGC GAACCCCCAA ACGAGCTGAT CCTCGGTCAC GAGACCGACC CCGCGCTTGC CGGGTTCCTT TCGGAAAAGA AGGGCCGGCA GGTAGAGATA GTAGTGCCGC AGCGGGGAGA GAAGAGACAG CTCCTGGACC TGGCAAGAAA GAACCTGGAG ATCGCGTTCT TCCGCGACAC CCTCAAGAGC GCTGAGCTGG GCGCAGCCCT TGGCCTGCCG CATCCCCCTG CCGTGATCGA GTGCTTTGAT ATCTCGCACC TTTCCGGCAC CGCCATGGTA GGATCGATGG TGCAGTTCCG GGACGGCAGG CCGGACAAGT CCGGCTACCG GCGCTTTAAG ATCAAAACCG TAGAGGGTAT TGATGATTTT GCCTCGATCG CAGAAGTGGT AAAACGGCGG TACACCCGGC TCATCGATGA GCATGCCCCG TTCCCGGACC TTGTCATTAT TGACGGGGGA AAAGGACAGC TTTCAGCAGC ACAGGAATCG TTGGCAGCGC TCGGGGCCAG CGCCCAGCCG GTCATTGCGA TTGCAAAACG CGAAGAGGAG ATCTACACTC CTCATAATGC ACTTCCGCTC AGGCTCGACA AAAAAAGCAT CGCCCTCCGT TACGTCCATG AGATCCGGGA CGAGGCGCAC CGTTTCGCTA TCACCTACAA TCGCCTGCTT CGGAAAAAGA AGGTCATTAC CTGA
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Protein sequence | MIDTAGLPEN PGCYLYSDAD GRIIYVGKAK NLKKRVSSYF TKKDHDPKTR SLVAHIASVD FVVTGTETEA FLLENTLIKK HQPKYNIDLK DAKRYAWIEL TREEFPRLVI ARRATDDGTF FGPFVSAAER DRVLAVAKKV FHLRTCKKLP KRPCLRRHMQ SCSAPCTGKV SPAEYDENVK KAALLLKGKS TELLDELRHE MAERASREEY ERALVLRNEI NAIGHLADRQ HVERRREYDQ DVIAYQVTDG KAYLTVFNVE RGTLANKEEF TFEAGEDILE EFLVQYYSDR EPPNELILGH ETDPALAGFL SEKKGRQVEI VVPQRGEKRQ LLDLARKNLE IAFFRDTLKS AELGAALGLP HPPAVIECFD ISHLSGTAMV GSMVQFRDGR PDKSGYRRFK IKTVEGIDDF ASIAEVVKRR YTRLIDEHAP FPDLVIIDGG KGQLSAAQES LAALGASAQP VIAIAKREEE IYTPHNALPL RLDKKSIALR YVHEIRDEAH RFAITYNRLL RKKKVIT
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