| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1059 |
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| Symbol | |
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| ID | 5410895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1044294 |
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| End bp | 1046627 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640868285 |
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| Product | HAE1 family efflux transporter |
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| Protein accession | YP_001404220 |
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| Protein GI | 154150602 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR00921] The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.101015 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACC AGATCTTTAG TGCCATTGCC CATACCGTCA ACCGCCGGCC CAAACTGGTA
GTCGGTATTA TCGCCATGGT ATTTATCATC GCCCTTTTTG GCATGACTAT GATCACCATG
CAGACCGGGG ATGACACCTA TTTAAACAAG AACTCACAGG CAGGAGTAAT CAATACAGAA
TATACCAACA CCTTCAACAA AGATTCGCTA ATCCTGATCA TTGAAACCAG TGACCCGGTA
AGTCCCACCG TACTCAACTA TATGGACCGG CTGGAGACAG ATATCCGGCA GCAACAGCAT
ATTACCAGCG TGTCAAGCGT TGTGGATATC CTCAAGGAAG AGAATAATGG TATCCTGCCC
CAGTCCACGG GAGAGATTAA CGCACTGGTC AACCAGATGC CCCCTGCAGT ACAGGCAACT
GCGGTTCCGT CAAACGTGCT AACTCTCGTG CAGGTCCAGC TGGATCCCGG ACTCTCGGAC
ACTACAGAAA CCTCGGTTCT TAACTCTGTG CAGCTGGCTG TCGACCAGTC CGACCCTCCT
GCGGGAGTGA CCGTTGAGGT ATCGGGTCAG CCCGCATTCA ACGCCCAGAT GCAGGCTGCC
ATGGGATCCC AGATGGGCAT CCTGATAGGG GCTGCAATGA TCCTGATGGT TATTGTGATG
GGTCTCCTCT TCTCCTACGT CAGCCACCGG TTCCTGCCGG TCGTGTTTGT GGGACTGGGT
CTTACCACGG CCATGGGTCT GATGGGCCTT GCCCATATCC AGCTGAATAT GGCCGTACTG
GGCGCCTTCC CGGTCATGAT CGGTCTGGGG ATTGATTACG CGATCCAGTT CCATGCACGG
CTCGATGAGG AGTCCCGGAA AGGCAGCCTT GACGATGCAG TCTATATGAC CATCACCCGC
ACCGGCCCTG CCGTGATGTA CGCTATGCTC GCCACTTCGC TGGGATTTGC TGCGATGTTT
ATCTCCACTG TGCCCATGAT CCAGTCCTTC GGCCTTGTGG CTATGATCGG GATCATGAGC
TGTTACTGCG TCTCTCTGGT AGGTATCCCG GCCGTAGCCC ATGTGATCCA CTATAAACCC
CGGCCCCAGG TGCCCAAGGT CTGCTATGCA GTAGGTGAGG ATGCCTGCGA GTTCCTGCCC
TCCGCACCTC AGAAAAAGCA GAAAAACTCC TGGTCATATG GCCAGTTCCT GACCAGCACT
TCGGTAAAAA TCGCCAAAAA CCCGGTTCCT ATCCTGCTCA TTGGTGCGCT CATCGCCGTT
ATTGGATTCC AGATCGATCC CCTCATCCCC ATAGAAGCAA ACCAGAACAA CTTCGTGCCG
AGCGATATGC CCGCAAAGAT CGAGATTGAC AAGGTCACCC GTATCTTGGG ATCCACAACA
ACTGCCGACT TCTATGTTCA GGGAGCCCGC GTCACGGATC TCGATACGTT GCGGTGGATC
AAGAGTTTCC AGGATTATGA GCTCGCTCAT CATCCCCAGA TCACTTCAGC TACTTCCATT
GTGACCTACA TTATGGCTTA TAACGGAGGA ACCATGCCGC AGACGCAGAG CCAGGCAGAT
GCGGCACTCG CAAAAATTCC GCAGAGTATT CGGGATGAGT ACCTCAGCGG ATCCATGCGC
GGCGTGATCA CCTTCGGAAT GACCAATCTC CAGATCCCCC AGGAGGAAGA TCTCAGGAAC
GTCATGGTCA ACGATATCGC GTTCCTCCAG CCACCCGTCG GGATATCCGT CCAGCCTACC
GGCTCTTTCG AGGTATTTAC CTCGCTAATC GGGGGAATGT CTGAATCAAA AGACGAGATG
ACCTTCCTTG GCTTTGTCCT CATCTTTATC TTCCTTGCGG GAGTCTACCG CCACTTCCAC
GCGATCTCCC CTCTCATCCC CATCATCTTT ATCGTTGGCT GGAATGCCGT CATGATGGAG
ATCCTCGGTA TCGCCTACTC TCCCCTCACA GCCACCCTCG GATCCATGAC CATTGGTGTC
GCTGCCGAGT ACACCATTCT CGTGATGGAG AGATATTCTG AGGAGGAAGA GCGCCTTCAT
GACCATACCG CTGCCATCCA GGAAAGTGTC AGCAGGATTG GAACAGCCAT TACGGTCTCG
GGCCTTGCGA CCTTTTTTGG GTTCTCTGCT CTCTGTCTTT CAGACTTCCC CATCATCAGT
AACTTCGGAG TATGTACGCT CATAGCGGTA GGGTTCTCGC TGGCTGGTGC CATCTTCATT
ATGCCTGCTG TCCTCTCCCT GATGGGCCAG TTTACCGAAT GGCTGGAGAC CAGGAAACAC
CGGCACCAGA TCGTACCAGA GACACTTCCA GAAACAAAAA ATCCAGATGT GTGA
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| Protein sequence | MIDQIFSAIA HTVNRRPKLV VGIIAMVFII ALFGMTMITM QTGDDTYLNK NSQAGVINTE
YTNTFNKDSL ILIIETSDPV SPTVLNYMDR LETDIRQQQH ITSVSSVVDI LKEENNGILP
QSTGEINALV NQMPPAVQAT AVPSNVLTLV QVQLDPGLSD TTETSVLNSV QLAVDQSDPP
AGVTVEVSGQ PAFNAQMQAA MGSQMGILIG AAMILMVIVM GLLFSYVSHR FLPVVFVGLG
LTTAMGLMGL AHIQLNMAVL GAFPVMIGLG IDYAIQFHAR LDEESRKGSL DDAVYMTITR
TGPAVMYAML ATSLGFAAMF ISTVPMIQSF GLVAMIGIMS CYCVSLVGIP AVAHVIHYKP
RPQVPKVCYA VGEDACEFLP SAPQKKQKNS WSYGQFLTST SVKIAKNPVP ILLIGALIAV
IGFQIDPLIP IEANQNNFVP SDMPAKIEID KVTRILGSTT TADFYVQGAR VTDLDTLRWI
KSFQDYELAH HPQITSATSI VTYIMAYNGG TMPQTQSQAD AALAKIPQSI RDEYLSGSMR
GVITFGMTNL QIPQEEDLRN VMVNDIAFLQ PPVGISVQPT GSFEVFTSLI GGMSESKDEM
TFLGFVLIFI FLAGVYRHFH AISPLIPIIF IVGWNAVMME ILGIAYSPLT ATLGSMTIGV
AAEYTILVME RYSEEEERLH DHTAAIQESV SRIGTAITVS GLATFFGFSA LCLSDFPIIS
NFGVCTLIAV GFSLAGAIFI MPAVLSLMGQ FTEWLETRKH RHQIVPETLP ETKNPDV
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