Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1058 |
Symbol | |
ID | 5410894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 1042836 |
End bp | 1044188 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640868284 |
Product | S-layer-like domain-containing protein |
Protein accession | YP_001404219 |
Protein GI | 154150601 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1361] S-layer domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.214671 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.146764 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACAC GCGATACTCC CTTATCCCCC GTCAACCGCA CGGTTTTTCC GGCCTGCGCC AGCCTGCCGC GGCTGTTATG CCTGGTTTCG CTCGCTCTTC TCGTGTTTGC TGTCCTGCCG GTGAGTGCAG GAGATCAGTA CATGGCAGGG AACCCCGAGC TCTCTGCGCA TATCAGCGGC ACCAATGAAT TTTCTCCCGG GGACGATGTC AGCCTGCCGG TTGTCATCGA CAACACCGGG CTAAACCAGT ACTTGATCGT AAACTCAGGG ATCATAAGCC CCACTGATCT TTCGAACACG GCCAAGCAGC TGACCGTTGC GCTCGGAGCC GGGGATGCAC CGCTTGTAGT TAAGGCCGAC CCGCAGGTTG TCGGCGATCT TGCTGCAAGC AACAGTGCCA CGGCTTCATT CCATATCACC GTGAACCGGT ATGCCCCGGC CGGAATATAC CAACTGCCGG TTGTCCTGAA TTACACGTAT CTGTACCAGG CAAACCAGGA AGGTACCGAG GCGCTCAACT ATCAGTACAA GAGCATCAAC GAGACGGTCT TTGTCCCGAT CACCATCAAG CCGGAAGTTC AGATTGCGGT CACCAGCGTT GAGGCAGCAA ATCTGAACGC CGGGATCGAG GGTTATGTCA ATCTGACCGT TGAAAACGTG GGGTCTGATA ACGGCAGAAA TGCGGTAGTC CGGATCCAGC AGAACGACCA GAGCCCGATT ACGCCGGCTG AAGGCAGCGT GTACATCGGG GACTTTCCGC TTGGCGCGAT ATCCAACTGC ACGTTCCGGG TATCTGTGGC AAGCACTGCC CAGCAGAAGA CCTACCCGCT CGATGTGCTG GTAACGTACA AGAATTATGA GGGAGATTAC GTGGACTCTC CCATAGAGAC CGTGGGGGTT CCGGTAGGCC AGAAAGTGGC GTTTGCGGTA ACCCCGGTCA GTGCATCAGT CCGGCCTGGT GCCAATGCCG TAATCACCTA CCAGTTCCAG AATACGGGCG GGACCACCGC GTATAACGCC GAAGCGCGGA TAAGTGCGAT TGACCCCTTC ACCAGTAACG ATGACACGGC TTTCCTTGGC ACCATGGCAC CCGGGGATGT ACGGACTGCA TCGTTTGCTG TATCTGTTGA TTCGGGTGCT ACCGTCAAGG AATATGGCCT GGATTCCGAG GTTATCTACC GCGATGCGCT CGATAACCAG TTCACCTCCG ATCCTCTCAA GGTCAATGTT GAGGTTGTGC ATGCTCCCTC CCTGACCGAA GCAATCGGCC TGCCCGGTCT TATCGTCATT ATCCTGGCCG TTCTTGCAGC GGCAGGCTAT GCAATCTATC GCAGGTGGTT TAGACCCCGG TAA
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Protein sequence | MITRDTPLSP VNRTVFPACA SLPRLLCLVS LALLVFAVLP VSAGDQYMAG NPELSAHISG TNEFSPGDDV SLPVVIDNTG LNQYLIVNSG IISPTDLSNT AKQLTVALGA GDAPLVVKAD PQVVGDLAAS NSATASFHIT VNRYAPAGIY QLPVVLNYTY LYQANQEGTE ALNYQYKSIN ETVFVPITIK PEVQIAVTSV EAANLNAGIE GYVNLTVENV GSDNGRNAVV RIQQNDQSPI TPAEGSVYIG DFPLGAISNC TFRVSVASTA QQKTYPLDVL VTYKNYEGDY VDSPIETVGV PVGQKVAFAV TPVSASVRPG ANAVITYQFQ NTGGTTAYNA EARISAIDPF TSNDDTAFLG TMAPGDVRTA SFAVSVDSGA TVKEYGLDSE VIYRDALDNQ FTSDPLKVNV EVVHAPSLTE AIGLPGLIVI ILAVLAAAGY AIYRRWFRPR
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