Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0613 |
Symbol | |
ID | 5411127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 580316 |
End bp | 581425 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640867832 |
Product | ABC-2 type transporter |
Protein accession | YP_001403774 |
Protein GI | 154150156 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCCCG GGATACTCAA GAGCGCCATT GCCATATTCC GGCGGGACAT CAAGAAATTT CTGAGTAACC CGTTCATCAT CATGATGACG CTCCTTATGC CCATCATGTA CCTGGTGGTC TTCGGGAACG CGATGGGAGG AACCCTCACC CACATCCCGG TGGGGGTAGT TCAGGAAGTT CCACCGTATA ACGATACGCC GCTCTTTACC AGTGCCGCAT ACCAGCTCAA CCACATCAGC CAGGGAAGTA ATAACGATGC AGAAAAACTG CTGGATGTCA CCGTATATAC CGATGAAGTC CAGGCCAAAC AGGATTTGGC GAACGGGAAA ATATCGGCAG TAGTCGTATT TCCCGCTTCT GTCTCAAACG ATAACGCAGT ACGGCTGTAC GTGGACAGTT CCGATTCTGT GACCCCCTCG CTCGTTGAAG AGGCAGTGAC ATCGGTCCTG CAGGGCCTTG GGGCAAATAA CCCGATTACT GTCGATAAAA TCTACGGTGA TATCAAGTAT ATCCAGTTCT TTGGCGTGGG CGTAATCATG ATGGCGATCT TCTCCGCAAC CTCATTTGGC GGCGGGCTCG CACTCATCAG GGACCGGGAG AACGGTATCC ACGAGGGATA CCTGGTCACC CCGATCAAAC GCTCCAGTAT CGTCGTGGGG ATCATTGCCA GCGGCACCGT ACGGGCATTT GTTGCGGGCT TTACCATCTT CTGGATAGAC CTGCTGGTCA CGGGTATCAT CCTCCAGAGT TTCCAGGATT TCCTGCTGGT CCTGCTCGTG ATCTTCATTG CCTGCGTGGG AGTGACAAGC CTTGTGGTCT CCTTTGCCTC CCGGTTCTCG GCCCAGCAGG AGTACCAGTC GGTCATTGTC TTCCTCAACC TGATCCTTTT CATGACCTCG GGCGCATTCT ACCCAGTGAC CGGCATGCCG GGCTGGCTGC GCTGGATTAC CACCATCAAT CCGGAATATT ACGGGGTCAA TGCTCTGCGG AGCATCATCC TCAGGAACCA GGGACTCAAC GTGATCGGGA TCGATCTTAT TGCCCTCCTG ATCTTTTCGA CCGCCATGAT CATCCTTGGC GTTGTCACTT ACCGGCGCAC GCTGGAATAA
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Protein sequence | MMPGILKSAI AIFRRDIKKF LSNPFIIMMT LLMPIMYLVV FGNAMGGTLT HIPVGVVQEV PPYNDTPLFT SAAYQLNHIS QGSNNDAEKL LDVTVYTDEV QAKQDLANGK ISAVVVFPAS VSNDNAVRLY VDSSDSVTPS LVEEAVTSVL QGLGANNPIT VDKIYGDIKY IQFFGVGVIM MAIFSATSFG GGLALIRDRE NGIHEGYLVT PIKRSSIVVG IIASGTVRAF VAGFTIFWID LLVTGIILQS FQDFLLVLLV IFIACVGVTS LVVSFASRFS AQQEYQSVIV FLNLILFMTS GAFYPVTGMP GWLRWITTIN PEYYGVNALR SIILRNQGLN VIGIDLIALL IFSTAMIILG VVTYRRTLE
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