Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0532 |
Symbol | rpl3p |
ID | 5411759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 518067 |
End bp | 519080 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640867751 |
Product | 50S ribosomal protein L3P |
Protein accession | YP_001403693 |
Protein GI | 154150075 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03626] archaeal ribosomal protein L3 |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.576221 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAAGA TAAACAGACC ACGCCGAGGC TCGCTGGCAT TCAGCCCACG GAAACGTGCA CAGAGCCCCA TTCCCAAATA CAAGTCCTGG CCCGAGCACA GCGGCGCACC CGCGCTGCTG GGTTTTGCCG GCTATAAGGT GGGCATGACG CATGTCCTCA TGGTCGATGA CCACAAGGAC AGCCCGACCG AGGGTAAGGA GATCATGGTT CCGGTGACGA TCATCGAGAT CCCGACCATG AAGGTTGCCG CTCTGCGGGT ATACACAAAG GACACTTACG GCAAGCACGC GCTTACGGAG ATCTGGGCGG AGCCGCTGGA CAGCCAGCTC TCCCGCAGGG TAACCTCACC CAAGAACTAC GACAGCACGG CAGCAAAGAA GAAGTATTCA GATGCACTTG CCGCCGGGCT GGTTGCTGAG ATCTACGCAC TTGCGTACAC CCAGCCGGCC ACGATGAGTG GTGTACCCAA AAAGGTGCCC GATCTCATGG AGATCAAGGT TGCCGGCGGG GACATTGCCA AGCAGTACGA GTACGCCTTC GGGCTTCTCG GAAAGGAGAT CCGGCTCAGC AACGTGATTG AGACTGGTGC GTACGCCGAT ATTACCGCAA TCACCATCGG TAAGGGTACG CAGGGCCCGG TCAAGCGCTG GGGTGTTACC CTCCGTAAGA GAAAACACTC CGTCGGCGGA AAAGAACGCC ATGTCGGAAC CCTTGGGCCA TGGAATCCCC ACCACGTCCG CTGGGAAGTT CCCCAGAGTG GCCAAATGGG CTACCAGCAG CGCACCGAGT TCAACAAGCG CATTTTAAAG ATCGGTGAGA ACGGTGCGGA GATTACACCG GCAGGTGGTT TCCTTAACTA CGGCGTTATC AGGAACGCAT ACGTTGTGAT CAAGGGCTCG ATTCCCGGCC CGGCAAAGCG CCTGATTCGT ATCCGCCCGG CAATCCGCCA GGGAGAACAT GTTGTCCGGT CGCCCGCGAT CCAGTTCGTG AGCGTCCAGA GCAAGCAGGG GTGA
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Protein sequence | MPKINRPRRG SLAFSPRKRA QSPIPKYKSW PEHSGAPALL GFAGYKVGMT HVLMVDDHKD SPTEGKEIMV PVTIIEIPTM KVAALRVYTK DTYGKHALTE IWAEPLDSQL SRRVTSPKNY DSTAAKKKYS DALAAGLVAE IYALAYTQPA TMSGVPKKVP DLMEIKVAGG DIAKQYEYAF GLLGKEIRLS NVIETGAYAD ITAITIGKGT QGPVKRWGVT LRKRKHSVGG KERHVGTLGP WNPHHVRWEV PQSGQMGYQQ RTEFNKRILK IGENGAEITP AGGFLNYGVI RNAYVVIKGS IPGPAKRLIR IRPAIRQGEH VVRSPAIQFV SVQSKQG
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