Gene Mboo_0359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0359 
Symbol 
ID5411421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp353077 
End bp354540 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content45% 
IMG OID640867573 
Producthypothetical protein 
Protein accessionYP_001403522 
Protein GI154149904 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR03183] putative sulfurtransferase DndC 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.296452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0315828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCA AAAAAACTCC TAACGGAACG ACCGATTCAG TATTCGATAA AAAAGGTTTG 
CAGAACATTT ATCGCGAGAT TCGAGAAGTT TACCTTAGTG ACAGCCGCCC GTGGGTTATT
GGTTATAGTG GTGGAAAAGA TTCAACAACT GCTCTTCAAC TCGTTTGGTA TGCAATTGCA
GAATTACCGG AAGAAAAAAG AACAAAACCG GTATTTGTCA TTTCCTCTGA CACCCTCGTT
GAAACGCCGG TAATTGTGGA CTATCTTACA ACAACTCTGG AGCGGATCAA TAAGACGGCA
GCAGAAAAGA AAATGCCATT CAAGGCATTC AAACTCACCC CTCGCATCAT TGATTCATTC
TGGGTGAATC TTATCGGAAA GGGATATCCA GCGCCAAGCA CCCAGTTCCG GTGGTGCACG
GAACGATTGA AGATCCGTAC CGCAGACCGG TTCATTCTTG AAAGTGTCAC AAAATACGGC
GAGGTCGTCA TGATCCTCGG CGTACGAAAA GGGGAAAGTG CAACCCGTGA TCAAGTGATG
AACCTGTATA AAATCGAAGG ATCAAAACTC TCTCATCATT CCCGATTTCC TCAGTCGTAT
GTGTACACAC CGATCGAAGA ATTTTCAGTT GACGATGTCT GGACTTACCT GCTGCAAAAA
CCATCGCCCT GGGGGAACAA CAACCGGGAT CTTCTCGCGC TCTACAAAAG TGCTCAGGAT
GGGGAATGCC CTCTTGTTGT TGACACTGAA ACAGCTTCCT GTGGGAACAG TCGGTTTGGA
TGCTGGGTCT GTACAGTCGT GCAGAAAGAC CGGAGCATGG AAGCACTTAT TGAAAGTGGG
GAAGACTGGA TGGAACCCCT TCTTGATTTC CGAAATGAGT TAGCTGAAAC CCAGATCCCG
GAGAAGAAAC TCGAATACCG GGATTACCGT CGGATGAATG GAAAAGTAAA ATTCATGCAG
GCCGGTGATT CCAAAAAAGT TATTCCTGGT CCCTATACCC TTGAATACTC AAAGATATTA
CTAAGAAAAT TGCTTGAAGC ACAGAAGAGT GTGCGTAAAA ATGGTCCCAA TCCAAACTTT
TCGCTGATCC TATTGGAGGA GCTCCAAGAA ATACGTCGTA TCTGGATGAC ACAGAAGAGC
GATTGGAATG ATTCGGTCGT AAAAATCTAC GAGGAGGTCA CAGGAGAACG TCTCGACTGG
ACGAAGGATG ATCTCGGCTC ATTTTCCCAA TCTGAACAGG ATCTCTTAAA GAAAATCTGT
GATGATCAAA AATTACCCCT CCGTCTCGTA ACAAAACTAC TGGATGTAGA GAGGCAGATG
CAGGGAATGA CCCGCCGTTC ATCGATTTAT AATCGAATCG GTGAGGTGCT GTCTGAAGAT
TGGATTTCAG AGGACGAAGT AAAGAAGGCT CTTATAAATC CAAAAGCAGT TGATACAAAA
CGCCGAAGTC TCCGATATGT GTGA
 
Protein sequence
MTSKKTPNGT TDSVFDKKGL QNIYREIREV YLSDSRPWVI GYSGGKDSTT ALQLVWYAIA 
ELPEEKRTKP VFVISSDTLV ETPVIVDYLT TTLERINKTA AEKKMPFKAF KLTPRIIDSF
WVNLIGKGYP APSTQFRWCT ERLKIRTADR FILESVTKYG EVVMILGVRK GESATRDQVM
NLYKIEGSKL SHHSRFPQSY VYTPIEEFSV DDVWTYLLQK PSPWGNNNRD LLALYKSAQD
GECPLVVDTE TASCGNSRFG CWVCTVVQKD RSMEALIESG EDWMEPLLDF RNELAETQIP
EKKLEYRDYR RMNGKVKFMQ AGDSKKVIPG PYTLEYSKIL LRKLLEAQKS VRKNGPNPNF
SLILLEELQE IRRIWMTQKS DWNDSVVKIY EEVTGERLDW TKDDLGSFSQ SEQDLLKKIC
DDQKLPLRLV TKLLDVERQM QGMTRRSSIY NRIGEVLSED WISEDEVKKA LINPKAVDTK
RRSLRYV