Gene Mboo_0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0117 
Symbol 
ID5411291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp107330 
End bp108238 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content59% 
IMG OID640867332 
ProductLPPG:FO 2-phospho-L-lactate transferase 
Protein accessionYP_001403284 
Protein GI154149666 
COG category[S] Function unknown 
COG ID[COG0391] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01819] LPPG:FO 2-phospho-L-lactate transferase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACGT TCCTTTCCGG GGGCACCGGT ACCCCCAAGC TGCTCCGCGG GATGCAGAAA 
GTGACGGACC GGCACGAGAT CTCGGTCGTG GTCAATACCG CAGAGGACAT CTGGATCTCC
GGCAACCACA TATCCCCCGA TGTCGACACG GTCATGTACC TGTTTGCCGG GGTTCTCAAT
ACCGATACCT GGTGGGGGAT CAGAAACGAC ACTTTTGTCA CCCACGAGGA GATCCTGCAC
CTGGGCCTGG GGGAGTACAT CGCAATTGGC GACAGGGACC GGGCGGTGCA TATTGCACGC
GGGAACATGC TCCGTGAGGG AATGCGGCTC ACGAATGCCA CCCGGACCCT CTGCGAGCGG
TTCGGTGTCC GGGAGAACGT ACTCCCCATG TCGGATACCG AAGTGACTAC CCGGGTAAAG
ACCGAGCTTG GTCTTATCCA TTACCAGGAG TACTGGATCC GGTCCCGGGG CCAGATCCGG
ATCGAGGATG TGGTGCGCTG CTCAAAAGTC CCCCCAGAGA GCTCCGAAGA GGTGATCCAG
GCAGTCGAAG CAAGCGATGT GGTGGTTATC GGTCCCTCCA ACCCCATCAC GAGCATCACC
CCCATCCTCG AATGCAAAGG GATCCGGGAG GCCATGGAGG ACAAGTACGT CATCGCCGTG
AGCCCGTTTA TCGGGAATGT CCCGGTCAGC GGCCCGGCTG CGGCCCTGAT GCAGGCATCG
GGTTTTGAAC CGACCTCGGC AGGCACCGCA GCATGTTACA AGGATCTCGT CGATCTTTTT
ATCCACGACA TCCGCGACCC GGTGGAGATG CGAGAGGCGA TCCGGCTGGA TACGCTGATG
ACCGGGGAAG AGAAAAGTAT CGGGCTCGCA GAGCAGATCC TTGCCCTTGC AAAGAGGGCA
AAAGCGTAA
 
Protein sequence
MITFLSGGTG TPKLLRGMQK VTDRHEISVV VNTAEDIWIS GNHISPDVDT VMYLFAGVLN 
TDTWWGIRND TFVTHEEILH LGLGEYIAIG DRDRAVHIAR GNMLREGMRL TNATRTLCER
FGVRENVLPM SDTEVTTRVK TELGLIHYQE YWIRSRGQIR IEDVVRCSKV PPESSEEVIQ
AVEASDVVVI GPSNPITSIT PILECKGIRE AMEDKYVIAV SPFIGNVPVS GPAAALMQAS
GFEPTSAGTA ACYKDLVDLF IHDIRDPVEM REAIRLDTLM TGEEKSIGLA EQILALAKRA
KA