Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3731 |
Symbol | cobN |
ID | 3625021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4809596 |
End bp | 4814212 |
Gene Length | 4617 bp |
Protein Length | 1538 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637702564 |
Product | cobaltochelatase subunit CobN |
Protein accession | YP_307174 |
Protein GI | 73671159 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.563162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.493716 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAAC AGTTGAATAA CGAAACGAAC CTTTTGAACA AAAAAATTAA GGCTTCAATA CTGGCATTTT TTATGCTTTT AACGTTGTTT TCGATTTCTC CGGCGGCTGG AAGCGGAAAT CTTCAGTATG AACTCATTGC CAGTACAACC AGTGATGCCG AAGGCAACTA CCTGTTTTCC GGCGTTCCCG ACGGAAATTA TACGCTTATA GCTCTTTATA ATGAGGACAA ATGGCGACGT GCCGATGAAC AAATTCAGGT TCAAAACGGA ACGGACCTTA TAGTGACTCT TGATACCTCC AGCAGGAATA TCGATGAAAA TGAGTCTCAG GCCCTTCTTG ACCTGCCTGT CAGTGAGGCT GGTCTTTCTG GAAGTGCTAT AATCAGTGGA CTTACCCGCC AGAAACAGAT GAATGCTGAC CCTATACCTC TGGGTTCCAC AAACGTTCTT CTGTTAAAGG AAGCTGGAAC AGAAACTCAG GATAATTCCA GTGAGACTCA GAGTAATTCC AGCGAAACTC AAGATAACTC CAGCCAGGTC CAGAGTAACT CCAGCAGCAG TCAGCACCTG AACATTGCCA TTGTGACCGG ATACAGAAGC CATGAGCTTC CACTAAAAAA TCTAGCGGAA GAGGTCAACA GTAACAACAG CCTGAACCTT ACTCTTAGCT GCTTTATGGC TGACTACGTA ATGGAAAATG ACGTTGACCT TAGTGCAATG GACATAATCT ACATCAACAT GCTCAGTCCT TCAACAGCCC AGAAGCTCAC ACCGACAGTG GACAGTGCAA TTGCTAACGG GTGTGTGGTT ATTGATGACG ATACCCTTCT GAATGAGAGC ATCCCGCTTC CTGAAGACCA GATCGAAAGT TACAGGGAAA AACTGAACGA CTACTGGAGT AATGGGGCTT ACGACCAGAA CAACTTGAAA AACCTTATAT TCTGCATCGC CAGTGACTGC TGCGGCAGAT CTGACCTGCT ATATGAGGAG CCGCATACGC TTCCAGAAAG AGCGATTTAT CACACGAACA TGACAGGTTA CTTTACCGAT TCTCTGGATA CCTATCTTGC CTGGTATTCA AACCGGAGCG ATGGAGGGCA TGTCTACGAT CCTGCAAAGC CTACAATTGC AATCACCATG TACCAGAGCT ATTTCCCCTT CCAGATTGAG CCAATTGATG CCCTGATCTC AAAACTGGAA GCAAAAGACT ACAATGTTAT TGCCACATAC GGATCTGATG ATCTTGCCTC CGGCGACTTT TTCAAGCAGG GAGATGAGGT TCTTGTGGAT GCAATTATTT CATTTACATA CTTTGGCAAC AAATTTGATG CCGAAGAGCT CGGTGTGCCT GTAATCAACG GCATTGTTGA CAATTACATG AACAGGACCG ATTATGAAGC CAGCAGCAGA CCGCTTCCTG CGGACAAGAT GATGAAGCTC GATTTGCAGG AACTCTGGGG AGCTATTGAC CCAATAATAA TGGCTGCAAC GGAAGTAGAT CCCGAAACCG AGACTGAAAC TTCGGTTTCC ATAGATTACC AGGTAGACTG GCTTGTTGAC CGTGTGGAAA GTTGGGTGAA CCTCAGTGAA ATTCCGGAGT CGGACAAAAA AGTTGCTATA ATCTATTATA ATCATGGAGG AGGGAAGGAT AACATAGGGG CTTCTTATCT TGATGTCATT CCAAGTTTGT CAAACCTTCT TGACGCTATG TCTAAAGACG GATATGCTCT GAATGAAAAT CAGACCTTAA ACGAAACTGA TCTCCTGAAT TTGATGCTTA CCCAGGGTAT AAACATAGGG ACCTGGGCAC CTGGAGAACT CCAGAAAATG GTTGATACCG GCAAAGTCGT TCTTCTCCCA GAAAGTACTT ATGAGAAATG GTTCTCGGAA CTCCCTGAAG AAAGACAGCA GGAGGTCATT GACCAATGGG GTCCTGCACC TGGAAAGATT ATGGTCTGGG AAAACGAGAC TGGAAAATAC CTTGTTATTC CCAGAATTGA GGTAGGGAAG AATGTGATTC TGGCTCCACA GCCTTCAAGA GGCTGGCTTG ATGATAATGA GGCTCTCTAT CACGACAAGG ATTTGCCTCC TCACCACCAG TACATTGCTT TCTATCTCTG GCTCCAGCAT TCTGAGGAAG AAGGAGGATT CGACAGTGAT GCCCTTGTTC ATTTCGGCAG GCATGGGACT CAGGAATGGC TGCCTGGAAA AGAGTTTGGG CTCTCTCGGT ACGACTGGCC TTCCCTGATG ATAGGTGATA AGCCCGTGAT TTATCCTTAC GTTATGGATG GGCTCGGAGA AGGCAATGAG GCAAAGCGCA GAGGAGGAGC AGTAATAGTT GACCATCTTG TACCCCCGAT TCTTTCGGCA GGAAGCTATG GGAATTATTC AAATCTGAGT GAAGCTATCC AGAACTATGA ACAGGCTGAG GCTGATGCCT CTCTTAAAGC GGCTCACAGG TCTGAAGTCT TAAACCTGAC TCAGTCTCTT TCCCTGGATA AAGAACTTAA CATGACAGAG GCAGAAAATA ACGAGACTTA CTTTAATACC ACTTTCCTTG AAGGGCTTGA AGATCTTCTG GACGAGTATA AGAGCCAGTC TATGCCTTAC GGGCTTCATA TCCTGGGTAC AAGCCCTAAA GGAGAGCAGC TTGTTGGCAT GGTAAATTCT ATGCTTGGAA CTGACTTTGC AGACTCGGTT AATGAATTCA ATAAAACCGA AGGGGCTCAG CTTTATTTGC TTGACCTTGT CCTTAACCAG GGAGTCAATT CCACAAACGC CCAGAAGCAG GTGCTCGGAA AAAGCAATGA AACCGTCAGT ACCCTCCTAT CCAATGCGGA AGAATATGCT GCAAACCTGG CTCTTGGAGA AGAGGAAATC GATCAGGTTC TCAATGCCCT GGACGGCAAG TTTATCCCTG GAAATCTGGG AGGAGACCCT GTTAGAAATC CGGAAACTCT GCCGTCTGGA AGAAACTTCT ATGCGTTTGA CCAGCGGATA GTGCCAACAG AAGCTGCCTG GACTCTCGGT CAGGAAATGG CTGACCAGAT GCTTGAAGCT TATGTTACCG AGCACGGGAC TTATCCGAAA AAGGTGGCTT ACGTACTCTG GGCAGGAGAA ACAACAAGGC ACGAAGGGGT TATGGAAGCA GAGATCCTCT ACCTGCTAGG GGTTAAGCCT GTATGGAACA GCGGCAGAGT AGTTGATGTG GAAGCTATTC CAATGGAGAC GCTGGGCAGG CCAAGAATTG ATGTTGTAAT GCAGATCTCT GGACTCTACA GGGACATGTA CCCTGACAAG GTTCGCCTGC TGGACAAGGC CGTAAAACTG GCTTATGCCC AGGAAGACTC TCCCAATTAT GTCCGGGAAA ATGCAGATGC TCTGAAATCT TCTTTGACGA GTGAAGGTTC CCTTAATGAT AGTGAGGCTC TGGACCTTTC CCTGCTCAGG ATTTTCGGGT CTTCGGACGG CGCCTACGGC ACAGGCCTTC CAAATGCGAT CTCTTCAAGT GATACTTGGG AAAGCAACGA CGCTCTTGCA GAGCTTTACA TCAACAAGAT GTGCAATGCC TACGGAGAAG ATGTGTGGGG CGAAGATCTG AAGGATCTTT TTAAAGAAAA CCTTGAAGGG GTTGAAGCTA CAGTGCACAG CCGGAGCACA AACCTCTACG GGACTCTGGA TAATGACGAT TTCTTCCAGT ACCTTGGAGG GCTGAATCTT GCTATCAGTT CCGTTTCGGG AGGAGAGTAT CCTGATTCAT ATATCACGAA CATGCTGACA AATGGGGACG AGAAAACCGA AACCCTAGAA AAGTTTCTTA CGAGGGAAAC CTACTCCAGA TATTTCAATT CGAAGTGGAT TGAAGGTATG CAGGGAAGCG GTTATGCAGG AGCCAGGGAA ATGTCGGATT TCGTTGAGAA CCTCTGGGGC TGGGAAGCTA CGAACCCGGA TTTGATCAGT GATGACATGT GGAACCAGGT GTATAAGACG TACGTGGCGG ACCAGGAACT TAGCAACTGG ATTAAGAAGA ATAATCCTTA TGCTTACCAG TCCATGACAG CCCGGATGCT GGAGACCGCA CGCAAAGGCA ACTGGGACGC CTCTGATGAG GTACTCGAAA GCCTTGCTAC GGAATATGAA GACTCCGTGG TCGAAGATGG GGTTACCTGC TGCCACCATA CATGCGGAAA CCCCCTTCTC AATAGCTACG TATCAGGCAT GGTTTCGGTT CCAGGTTTTA GCGAAGCAAT AGAAAATGCT ACGCAGGAAT CTCTTGAACA AGAAGAGACT GAAGAACAAA GTAGCAGTGG TGAAAAACAC AGCAGTGGTG GTAATAAAGG AAGTTCGACA CCTGTAATTC GGAGTACGGA GAGTAGCAAT CAGACTGTTG TAGAGAGCGA TACGGGATAT GGGGTCGATT CCCCCGAACC TGCACCTGAG GTCTCGAAAT CATCTGCTGA CTCGGATTAT GTTGAAGGCT ATGAGATGCA GAAAGATTCC ACCGAAGAAC CAGATAATAG CGGTTTCTCA TTTTCGGGTT CCGATATTTT TGGAATTCTC TTCGTGATAG CAGCCATTGG TGGAATCTAT TTCGGGTTCT ATAAAAAGAA AATGTAA
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Protein sequence | MNEQLNNETN LLNKKIKASI LAFFMLLTLF SISPAAGSGN LQYELIASTT SDAEGNYLFS GVPDGNYTLI ALYNEDKWRR ADEQIQVQNG TDLIVTLDTS SRNIDENESQ ALLDLPVSEA GLSGSAIISG LTRQKQMNAD PIPLGSTNVL LLKEAGTETQ DNSSETQSNS SETQDNSSQV QSNSSSSQHL NIAIVTGYRS HELPLKNLAE EVNSNNSLNL TLSCFMADYV MENDVDLSAM DIIYINMLSP STAQKLTPTV DSAIANGCVV IDDDTLLNES IPLPEDQIES YREKLNDYWS NGAYDQNNLK NLIFCIASDC CGRSDLLYEE PHTLPERAIY HTNMTGYFTD SLDTYLAWYS NRSDGGHVYD PAKPTIAITM YQSYFPFQIE PIDALISKLE AKDYNVIATY GSDDLASGDF FKQGDEVLVD AIISFTYFGN KFDAEELGVP VINGIVDNYM NRTDYEASSR PLPADKMMKL DLQELWGAID PIIMAATEVD PETETETSVS IDYQVDWLVD RVESWVNLSE IPESDKKVAI IYYNHGGGKD NIGASYLDVI PSLSNLLDAM SKDGYALNEN QTLNETDLLN LMLTQGINIG TWAPGELQKM VDTGKVVLLP ESTYEKWFSE LPEERQQEVI DQWGPAPGKI MVWENETGKY LVIPRIEVGK NVILAPQPSR GWLDDNEALY HDKDLPPHHQ YIAFYLWLQH SEEEGGFDSD ALVHFGRHGT QEWLPGKEFG LSRYDWPSLM IGDKPVIYPY VMDGLGEGNE AKRRGGAVIV DHLVPPILSA GSYGNYSNLS EAIQNYEQAE ADASLKAAHR SEVLNLTQSL SLDKELNMTE AENNETYFNT TFLEGLEDLL DEYKSQSMPY GLHILGTSPK GEQLVGMVNS MLGTDFADSV NEFNKTEGAQ LYLLDLVLNQ GVNSTNAQKQ VLGKSNETVS TLLSNAEEYA ANLALGEEEI DQVLNALDGK FIPGNLGGDP VRNPETLPSG RNFYAFDQRI VPTEAAWTLG QEMADQMLEA YVTEHGTYPK KVAYVLWAGE TTRHEGVMEA EILYLLGVKP VWNSGRVVDV EAIPMETLGR PRIDVVMQIS GLYRDMYPDK VRLLDKAVKL AYAQEDSPNY VRENADALKS SLTSEGSLND SEALDLSLLR IFGSSDGAYG TGLPNAISSS DTWESNDALA ELYINKMCNA YGEDVWGEDL KDLFKENLEG VEATVHSRST NLYGTLDNDD FFQYLGGLNL AISSVSGGEY PDSYITNMLT NGDEKTETLE KFLTRETYSR YFNSKWIEGM QGSGYAGARE MSDFVENLWG WEATNPDLIS DDMWNQVYKT YVADQELSNW IKKNNPYAYQ SMTARMLETA RKGNWDASDE VLESLATEYE DSVVEDGVTC CHHTCGNPLL NSYVSGMVSV PGFSEAIENA TQESLEQEET EEQSSSGEKH SSGGNKGSST PVIRSTESSN QTVVESDTGY GVDSPEPAPE VSKSSADSDY VEGYEMQKDS TEEPDNSGFS FSGSDIFGIL FVIAAIGGIY FGFYKKKM
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