Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3717 |
Symbol | |
ID | 3625007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4792848 |
End bp | 4794752 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637702550 |
Product | carbon-monoxide dehydrogenase, catalytic subunit |
Protein accession | YP_307160 |
Protein GI | 73671145 |
COG category | [C] Energy production and conversion |
COG ID | [COG1151] 6Fe-6S prismane cluster-containing protein |
TIGRFAM ID | [TIGR01702] carbon-monoxide dehydrogenase, catalytic subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAAAG AAAGAATTTC TTATCACGAA TCCGTTCTGA ATATGTATGA ACGGATAAAA AAAGACGGGA TGACGAATGT CTGGGACCGT TACGCAGCCC AGGGTCTGGG AGGAAATCCA GACAAAAGAT GTACTTTCTG TATGGGAGGA GTGCGCTGCG ACCTGTGTTC CAACGGACCA TGCCGTTCGG ATGCTGCGAA AGACAAAAGA GGAGTATGTG GAATCACTGC CGATGGTATG GCGATGCGGA TGATGCTTCT CAGAAATGTG ATGGGAGCTT CTACTTACCA CTATCATACG GACCAGACCA TAAGGACCTT GAGGGAAACT GCCAGAGGCA ACACTCCTTA TACGATAAGG GAACCTGAAA AGTTAAGGAC GTTTGCAAGC CGGCTGGGGC TCAAAACCGA AGGATCGGAC TCAGAAGTTG CTTTTTGCCT TTGTGAGTTT GTAGAAAAGG AGTTTAACAA ACCTGCCTAC GAACCAAGCC GGATTGTTGA GTTCCTCGCC CCTCCCGAAA GAAAAGAAAA GTGGAGAACA CTGGACATAT TTCCAGGTGG AATCTACGGG GAGATGATGC TTTCCACAAG CTCCTGCCTG ACGAATGTGG ATGGGTATTA TGCGAGCCTG GCACTAAAAG CCATGCGTCT GGGAATTGCA ATGGGATACC AGAGCCAGAT TGTAAACGAA TATTGCCAGG ACATCCTTTT TGGAATTCCC AGTCCCCACA CTATGAGAGT AGATCTTGGT GTGCTTGATC CTGAGTACGT GAATGTGCTC CCTAATGGGC ACGAACCATT TATTGGCTTT GCCATGGTCC AGCTTGCCCG AAAACCGGAA TGGCAGGAAA AAGCAAAAAC TGCAGGGGCA AAGGGCCTGA GGGTTATTGC CAGTATTGAA ACAGGGCAGG AAATGATCCA GAGATGGGAG GAAGACAATG CTTTCTACGG ATTTACAGGC AACTGGATTT CCCAGGAAGC GGTATTTGCA AGTGGAAGTG TGGATCTCTT TGCAGCAGAT ATGAACTGTT CTCTCCCTGT TGCTCCTCTT TATGCTGAAA AATACAATTT TAAACTCATG CCTGTAAGTG AACTCGTAGC CTTCGAAGGC ATAGGGGAAC GCCTGAACTA TAATCCCACC GAAGCCGAAA AGCAGGCAGC ACAACTCCTG GATATGGCGA TTGAAAATTT CAAAAAACGA AAAAGTTCGA TAGAATCTGT TTCGAAGCTC CCTATGAAAG AAGCCGTGGT AGGCTTTTCA AACGAGAGCA TCCTTGCAGC GTTTGGAGGT AGCTTTGACC CTCTCCTTGA TTCTATAAAA AACGGAGCAA TAAAAGGAAT TGTGGGAATG GTATCCTGTA CTACCTTGAG GGACTACGGT CAGGATGTAC ACAGCGTTGC TGTGGTAAAA GAGCTTATCA AAAGAAATAT CCTTGTTCTG TCCCTTGGTT GCGGAAACGG GGCCATGCAG GTAGCAGGCC TTTGTACTCC TGAAGCCAGA GAATTTGCAG GAGACAGTCT AAAAGCCGTA TGTAAAGCCC TTGGAGTTCC ACCAGTGCTC AGCTTTGGGA CCTGTACTGA TACGGGCAGG CTTGCCGACC TTCTTGGAGC CATCTCCGGA GCTCTCGGAG GAGTTCCGGT TCCTGACCTG CCGGTTGCGG CTGCAGCCCC TGAGTACATG GAACAGAAAG CTACAATAGA TGCTATCTTT GCTCTGGCCC TCGGGCTCTA TACTTATGTG AACCCTGTCC CAACCGTCAC AGGCGCCCCG AATCTGGTCA AACTGCTTAC AGAAGACTGT CGGGAAGTTA CAGGCGGGGT CATGAACGTG GAAAAAGATG CAGTAAAAGC CGTTGATGGG ATAGAACAAC ACATTATGGA AAAGAGAAAA AAGCTTGGGA TCTAA
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Protein sequence | MDKERISYHE SVLNMYERIK KDGMTNVWDR YAAQGLGGNP DKRCTFCMGG VRCDLCSNGP CRSDAAKDKR GVCGITADGM AMRMMLLRNV MGASTYHYHT DQTIRTLRET ARGNTPYTIR EPEKLRTFAS RLGLKTEGSD SEVAFCLCEF VEKEFNKPAY EPSRIVEFLA PPERKEKWRT LDIFPGGIYG EMMLSTSSCL TNVDGYYASL ALKAMRLGIA MGYQSQIVNE YCQDILFGIP SPHTMRVDLG VLDPEYVNVL PNGHEPFIGF AMVQLARKPE WQEKAKTAGA KGLRVIASIE TGQEMIQRWE EDNAFYGFTG NWISQEAVFA SGSVDLFAAD MNCSLPVAPL YAEKYNFKLM PVSELVAFEG IGERLNYNPT EAEKQAAQLL DMAIENFKKR KSSIESVSKL PMKEAVVGFS NESILAAFGG SFDPLLDSIK NGAIKGIVGM VSCTTLRDYG QDVHSVAVVK ELIKRNILVL SLGCGNGAMQ VAGLCTPEAR EFAGDSLKAV CKALGVPPVL SFGTCTDTGR LADLLGAISG ALGGVPVPDL PVAAAAPEYM EQKATIDAIF ALALGLYTYV NPVPTVTGAP NLVKLLTEDC REVTGGVMNV EKDAVKAVDG IEQHIMEKRK KLGI
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