| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3607 |
|---|
| Symbol | |
|---|
| ID | 3626751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 4628190 |
|---|
| End bp | 4629494 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637702439 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_307054 |
|---|
| Protein GI | 73671039 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1373] Predicted ATPase (AAA+ superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.46901 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.593311 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAATT TTGACAACAG ACAAAAATTA GAGCCCCTAT CTATGATCTG CGGTCATCAT
AATTTTTTTC AAAATGCCCC AGATTTAATC TCCAGAGATA TTTTCCCCTG CTGTTCCGTA
GGAGACAGTG AAATTAAACT CATCTCTGGA CCCACTCATG CAGGTAAAAC CACCTTCATG
AGTCAGGTTG CCAGTAACCT GGTTGGAGTA AAAATTTATA TTGATTTTGA AGAGAGTCAG
GTACAGGAGC TGGGATCTGG AGATTTACAG GCTATTGAGG AGACTGCAGC CGAAATCCGC
AAAAAAGAAA CTGAAGACGG AGCAGGAAGG ATTTTCTACT TTTTTGATGA AATCCAGAAT
CTACAGGGCT GGGAGAATTG GGTTGACAGG CTTCACAGAC AGGGAGCAGA AATTTATCTA
ACTTCATCGA GATCAAAATT AATAAATGAG TTTTCTTCCA GATTTTCAGG TAGATGTAAA
ATTTTAAGGC TTTTCCCGTT CTCTTTTAGG GAATATCTGC AGATTAAAGG TAATATAATA
GCAGAGCCGA ACTTTCTAAC GCTTGCAAGC AGTGATGAAC TGTTATGTAT GTTTTTCCAG
TATTTTGAAA ACGGTGGTTT TCCGGATGTA ATCAAAAAAG ATGACATAAG TCTATCCCGA
AAATATTTTG AAGAAGAGCT GCAAAAAGGG GCTGCAGCGG GGTATGATAT TCAGAAGTTA
AAAAAGTTAG CCATATTCCT GATTTCGAAC ATGGCTTCGG AATACTCCCC CGATACCCTA
AAAAAAGTAA GTGGAATTGA AAGTGAGGAA CTCATAGACA CTTATCTGGA CTATCTAGAA
GACATTTTCT TGCTCTATCG GGTCCCAAAG CTCAACAGAC TCCAGGAAAG TGGGAAGGAA
AAAGAAAGTC CCTGTAAGAT TTATGCAGGC GATACCGGAC TTTTCAAGGC AGTATATCCC
GGTTACCCTG ACAGCCTTGG GCTGAGATTT GAGAACCTTG TGTTCCTTGA ACTGCTGAGA
AGGGAAAAAC AGGTATTCTA CTTCCGGAAC AAAAGAGAAT GTGATTTTAT CATTAAGGAA
AAAGGCAGCC AGAAAGTTTC AGCTGCAATT CAGATCTCGG TTTGCTTCGG AAACCCTGCA
GTGAAGGAAA GAGAAATTCT GGGGCTTATG GAAGCTCTTG ATGAGTACGG CCTTGAAGAG
GGGCTTATTC TGACAATGGA CGAAGAAGAG ACCATTATAG TTGACAGCAA AGGCGGAAAA
AAAATAATCA TGGTTAAATC AGTGTGGAAA TGGATGCTGG AATAA
|
|---|
| Protein sequence | MQNFDNRQKL EPLSMICGHH NFFQNAPDLI SRDIFPCCSV GDSEIKLISG PTHAGKTTFM
SQVASNLVGV KIYIDFEESQ VQELGSGDLQ AIEETAAEIR KKETEDGAGR IFYFFDEIQN
LQGWENWVDR LHRQGAEIYL TSSRSKLINE FSSRFSGRCK ILRLFPFSFR EYLQIKGNII
AEPNFLTLAS SDELLCMFFQ YFENGGFPDV IKKDDISLSR KYFEEELQKG AAAGYDIQKL
KKLAIFLISN MASEYSPDTL KKVSGIESEE LIDTYLDYLE DIFLLYRVPK LNRLQESGKE
KESPCKIYAG DTGLFKAVYP GYPDSLGLRF ENLVFLELLR REKQVFYFRN KRECDFIIKE
KGSQKVSAAI QISVCFGNPA VKEREILGLM EALDEYGLEE GLILTMDEEE TIIVDSKGGK
KIIMVKSVWK WMLE
|
|---|
| |