Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3595 |
Symbol | |
ID | 3626737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 4614041 |
End bp | 4616518 |
Gene Length | 2478 bp |
Protein Length | 825 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637702426 |
Product | ATP-dependent DNA helicase |
Protein accession | YP_307043 |
Protein GI | 73671028 |
COG category | [R] General function prediction only |
COG ID | [COG1202] Superfamily II helicase, archaea-specific |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0142598 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTTGGG TCCTAGGTTA CGCTGAAAAA TCGAAGATAA GAATTATGGC TATAAAGGAC CGGATGAAAC AGCCGCTTTA TATGGCCGAA CTCCTCATAA AAGATAGTTA CAAAGGGCCT CGCCCTCTTA AAATCAGGCT TTTTACCGGC AAAAAAAAAG AAGAATTCAT TCCACCACAG CAGTTTATAG AGCTTCTGCG CAGTGCAAAC CGAATAATGC TTGCAGAAGG AGGAGATCCT GCAAATGAGG CTGCTTTTCT GGAAATGCTT AAAGGATTTC AACTTAATGC GGACAAAGTA AAAATCTGTA AACACTGCTG GATAAAGAAG CGCTTCAACT TTGTAAACAG TAAATCCATC AAATACAATA ACGAACTCAT CTGCCTGGAC TGTGCAAAAG AGGAACTTTT GCGTGCAGTC CGTTCGGCTG GTGCGCCGTA TGGGGAAAAA TCCATAGATT TCCTGGAGCA GGTGCTCTCA AAAACCCGAG ACCTTGACAG GACTATCCGG ATGCTGAGCC CTGAAAGGCT GGACCCTGAG TTCACACGCT ACGATACTAT AAGAACAAAT CCATCCAGTA CTACAGTTAG AGTAAAAAGC CTGCCTCTTC AAAAGAAATT CAAGAAAATG CTGCTCGAGA AATCCGAGAC CCTGCTGCCT GTGCAAGCAT TATCAATAGA ATCCGGGCTC CTAGAAGGAA AAAACCAGTT TGTAGTCTCA GCAACAGCAA CCGGAAAGAC CCTTATAGGG GAGATGGCAG GGATCCAGAA CCTCTTTAAT AAAAAAGGAA AAATGCTCTA CCTCGTTCCT CTGGTTGCAC TTGCAAACCA GAAGTATGAT CAGTTCAAAG AACGCTATTC AAAACTTGGG TTCACCACAT CCATAAAGAT CGGGGCAATT CTCATAAAAA CGTCTCAGCG CGTGAAGATG CAGACTAGCC CGGGTGCGGA TATCATTGTA GGGACTTACG AAGGCATAGA CCATATGCTT CGGTCGGGAA ATGCCGATTT TCTGGGCAAA ATCGGAACTG TGGTAGTGGA CGAAGTACAT ACTCTCGAAG ACCAGGAGAG GGGCCACAGG TTGGACGGGC TTATTGGGAG ACTAAGGTAC GTGGCACCCG AAGCTCAATT CATCTATCTA TCTGCAACCG TTGCAAATCC CGAAGGCTAT GCAAAGAAAC TCGGAGCCCG GCTTGTCCGT TACGAGCACA GACCGGTTCC TATTGACAGG CATCTTCTTT TCTGTCAGGA AAACGAAAAG GCAAAATTGA TTTCCCAGCT TGCGAAAGAA GAATATTCAA TGTTATCTTC AAAAAAGCAC AGGGGCCAGA CAATTGTCTT TACAAACTCC CGTCGAAACT GTCATAAACT TGCAGGAGCC CTTTCGATTC GGGCAGCACC CTATCATGCC GGGCTTTCCC AGTATGAAAG GAAGAAAGTT GAAACTCGCT TTGCAAAAGG AGAACTTCCG GTAATTGTGA CCACGGCTGC CCTTGCGGCT GGGGTGGATT TTCCGGCTTC CCAGGTGATC TTTGAATCCC TGGCAATGGG AATAGACTGG ATTTCAGTCC AGGATTTTCT GCAGATGAGC GGAAGGGCAG GGAGGCCTGA CTACCATGAT AGGGGAGTTG TTGTGCTGAT GCCTGTGCCT GGAAAATCAT ATTCAGGTTC CCAGTCCGAT ACCGAAGAAG AGGTTGCAAT TAAACTACTC CAGGGAGAAA TGCTCTCAGC AGGCGTAAAA TATGGAGAAG CCGAACAGCT TGAGGAAGTG CTTGCATCGG TTGCAGTCAC CTCCTCGGTG CAGGACCTTA GAATGATCCA CAACCAGATG TTTGGAGGCT ACGACCTGAA TAAATTGATT CTGCGCCTTC AAAGCTACCG TTTTGTGGAA AGAAAAGGAA ACCGAATAAC GCTTACGCGT TTTGGAAAAA TTATTGCAGC TCATTTCCTT CCTGTATCGA AAGCTTTTCT GATTCGGGAT GCAGTGCTTG GAGAGAATGA ACCCCTGAAG ATCGCAACCA ACCTGGAGTT TTTTGATGCA GCGTATTTCA AATATACTAA CCAGATCGGA AGCTCCCTGC ATGTGAATAT GCCTTCAAGG ATTTTTCAGG GAGCTACACT TGATATAATC TTTGACGGGG AGTCTCTTTC CCAGCTTGAT GCAAAAATCC AGGAACTCCT GTTAAACTTT GCTTCGGACT TTTTAACCTG TAAATGCAAA GATTCACCTT ACTGCGGCTG CGCAGAACAG AAGTTTTCGG AAAAAATAAT TAAGCTGCGT ACAGAAGCTC TTGAGCCTGC ACAGATAATA AAGAAACTTG AAAACAAGTA CGGGATCTCG GCCTATCAGG GTGACGTTTT CGGGTACCTG GACAACGCAG TCAGAAACCT TGACGCCGTG GAACTTATAG CAAAAGTACA CTCTAAAAAG GGAGTTGCAG AAGAAGCAAA AAAGCTTAAA AAGAAAGTTC AGGGTTAA
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Protein sequence | MLWVLGYAEK SKIRIMAIKD RMKQPLYMAE LLIKDSYKGP RPLKIRLFTG KKKEEFIPPQ QFIELLRSAN RIMLAEGGDP ANEAAFLEML KGFQLNADKV KICKHCWIKK RFNFVNSKSI KYNNELICLD CAKEELLRAV RSAGAPYGEK SIDFLEQVLS KTRDLDRTIR MLSPERLDPE FTRYDTIRTN PSSTTVRVKS LPLQKKFKKM LLEKSETLLP VQALSIESGL LEGKNQFVVS ATATGKTLIG EMAGIQNLFN KKGKMLYLVP LVALANQKYD QFKERYSKLG FTTSIKIGAI LIKTSQRVKM QTSPGADIIV GTYEGIDHML RSGNADFLGK IGTVVVDEVH TLEDQERGHR LDGLIGRLRY VAPEAQFIYL SATVANPEGY AKKLGARLVR YEHRPVPIDR HLLFCQENEK AKLISQLAKE EYSMLSSKKH RGQTIVFTNS RRNCHKLAGA LSIRAAPYHA GLSQYERKKV ETRFAKGELP VIVTTAALAA GVDFPASQVI FESLAMGIDW ISVQDFLQMS GRAGRPDYHD RGVVVLMPVP GKSYSGSQSD TEEEVAIKLL QGEMLSAGVK YGEAEQLEEV LASVAVTSSV QDLRMIHNQM FGGYDLNKLI LRLQSYRFVE RKGNRITLTR FGKIIAAHFL PVSKAFLIRD AVLGENEPLK IATNLEFFDA AYFKYTNQIG SSLHVNMPSR IFQGATLDII FDGESLSQLD AKIQELLLNF ASDFLTCKCK DSPYCGCAEQ KFSEKIIKLR TEALEPAQII KKLENKYGIS AYQGDVFGYL DNAVRNLDAV ELIAKVHSKK GVAEEAKKLK KKVQG
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