Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3581 |
Symbol | |
ID | 3625805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4595281 |
End bp | 4596177 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637702412 |
Product | pyridoxal biosynthesis lyase PdxS |
Protein accession | YP_307029 |
Protein GI | 73671014 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.073488 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTTTG AACAATTAAG ACATGGGACC GAACTTATCA AAAGGGGCTT TGCAAGAATG CAGAAAGGGG GTGTAATCAT GGATGTTACA AACCCGGAGC AGGCCAGGAT CGCAGAAGAA GCCGGAGCAG TTGCTGTTAT GGCCCTCCAG GCTGTTCCTG CGGATATCAG AAAAGCGGGT GGGGTTGCCC GGATGGCCGA CCCTGAGATT GTCCAGCAGA TTATTGATAC GGTTACAATT CCTGTAATGG CAAAAGCCAG GATCGGGCAC TTTGTCGAAG CCGAAATTTT AGAAGCTCTG GGTGTTGACA TGGTGGACGA ATCCGAAGTC CTGACCCCTG CTGACCCCTA CTTCCACATA GACAAAATGC AGTTCACCGT GCCTTTTGTC TGCGGTGCCA GAAACCTTGG AGAAGCCCTA AGGAGAATTA ACGAAGGGGC AGCCATGATC CGAACTAAAG GAGAGGCTGG AACCGGAGAT GTCAGCCAGG CAGTTAAGCA CATGAAGCAG ATTCAGGGTG AAATCCGTGC CCTTGCCGGG AAGACTAAAG AAGAGTTGAT TATGGTTTCA AGGGAAATCG AAGCTCCGAT TGAACTTGTA GTTGAAACCT CAAAAATGCA GCGTCTGCCT GTGGTAAACT TTGCAGCCGG CGGAGTTGCG ACCCCTGCAG ATGCCGCTCT TATGATGCGC CTTGGTGCAG ACGGGGTCTT TGTAGGTTCA GGTATTTTCA AAGCTGAAAA CCCTGAGAAA ATGGCAAAAG CCGTTGTTGA AGCCGTAAAC AACTTTGACA ACCCTGCAAA GCTTGCAGAG ATCTCAAAAG GTGTAGGTGC CGGTATGAAA GGCATCAGCG CAGACACGAT TCCTGAACAG GAAGCCCTTC AGGAACGCGG TTGGTAA
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Protein sequence | MDFEQLRHGT ELIKRGFARM QKGGVIMDVT NPEQARIAEE AGAVAVMALQ AVPADIRKAG GVARMADPEI VQQIIDTVTI PVMAKARIGH FVEAEILEAL GVDMVDESEV LTPADPYFHI DKMQFTVPFV CGARNLGEAL RRINEGAAMI RTKGEAGTGD VSQAVKHMKQ IQGEIRALAG KTKEELIMVS REIEAPIELV VETSKMQRLP VVNFAAGGVA TPADAALMMR LGADGVFVGS GIFKAENPEK MAKAVVEAVN NFDNPAKLAE ISKGVGAGMK GISADTIPEQ EALQERGW
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