Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3569 |
Symbol | |
ID | 3626498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 4582064 |
End bp | 4582837 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637702401 |
Product | dipeptide ABC transporter, permease |
Protein accession | YP_307018 |
Protein GI | 73671003 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0377777 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTTT TTGCTCCTGT GATAACAAAT TATCCTCCTC AGAAGATCTC AGGTGATTCA CTCGAACCTC CTTGTCCCGA ACACATACTT GGAACCGATG AACTCGGTAT GGATATCTGG TCACAGATAT GTTATGGTGC AAGAATGAGC CTTACAATAG GGCTTGCAGT AGCTTTTATA GCAGGTTTTG GAGGAGGAGC TATTGGAATA CTGGCAGGAT ATATTGGAGG GCACGTTGAT CAGGGCTTGA TGAGAGTAAT TGATGTTACA ATGGCTCTTC CAAGCTTTCC TCTTCTGATC GTAATATCTG CTTTTCTTGG TCCAAGTATT CTTAACGTAA TTCTTATACT TGTTATTTTC AGCTGGGCCA AACCTGCACG TATTGCACGT TCCCAGACCC TGTCACTAAA GAAGAACAAC TATATTATTG CAGCCCGGAA TTACGGCGCA AAGCCATTTT ACCTGCTCCG GAAGCATATA TTTCCTGAAG TTCTGCCTGT CCTGTTTGTG CTTGTCATCG GGATATCCTC ACACGCAATC ATAGCCGAAG CAGGACTTGC CTTCCTGGGC CTTGGAGATC CTACTTCCAA GAGCTGGGGA ATGATGCTTA ATCATGCAAC CAGTTTCCGT TCGATATATT TTACACCCTA CTGGCAATGG TGGTTATTGC CTCCGTTGTT TATGCTCATT TTCCTCCTGA TCTGTCTTGC GTTCATAAGC AGAGATATGG AAAGGATACT CGATCCAAAA TTAAAGATAA AAAAAGGCTT CTGA
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Protein sequence | MAVFAPVITN YPPQKISGDS LEPPCPEHIL GTDELGMDIW SQICYGARMS LTIGLAVAFI AGFGGGAIGI LAGYIGGHVD QGLMRVIDVT MALPSFPLLI VISAFLGPSI LNVILILVIF SWAKPARIAR SQTLSLKKNN YIIAARNYGA KPFYLLRKHI FPEVLPVLFV LVIGISSHAI IAEAGLAFLG LGDPTSKSWG MMLNHATSFR SIYFTPYWQW WLLPPLFMLI FLLICLAFIS RDMERILDPK LKIKKGF
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