| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3462 |
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| Symbol | |
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| ID | 3626435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4441941 |
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| End bp | 4442624 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637702291 |
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| Product | hypothetical protein |
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| Protein accession | YP_306915 |
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| Protein GI | 73670900 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1549] Queuine tRNA-ribosyltransferases, contain PUA domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00892274 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACCCA TTATTCCTGA AGATGAGCGT TCTAAAGAAC CTCTTGACAC TGATAGGGTA
ATTTATCACC CGGATATGAT AAGGGCTAAT GAATGGGTCC TGAACGAATA CGAAGCTCCT
TATAGGGAAC TATGTATTTT TGTTCCCTGT GCCAAAAGGA AACCCTATCA TGAAAGTCCC
TCTCACAAAA AATTCGATCG AATAATCTTC GGGATTGCAA AACCTGAAGA TGTACATATA
GTAACCTTCG GAACCTGTGG AATTACCCCA CGGGAACTTG ATACGCAATA CCCATTCATG
CATTACAGCT TTATGATGGG TAAATGCAAC GTGGCAAAGA TCAAGCGAGA TTTCATAAAA
ATGGAAAGTG AAAGACTTGC TGCTTATCTT GAAAAAACAA GGGATAATTA CAAACACAGA
ATAGCTTACT GTATTGGGGA TTTCCGAACT GCAATGGAAA AAGCCGTAGA AATGGTTGAC
GTAGAAGTTG ACATCGTGCC GAGAGAATCA ACGATTCAGA AGATGATTCA GCCAGATAAG
CCTTTTATTT ATAACAGCCT TTCCTCAAGA GAGTACCTTC AGGACTTTTC AGACGCGATT
ACGGATGCTC TTAAGCTTCC AAAGAGAAAA GTAGGTCTTA AAGAAGATCT TTCTGTTGAT
GATGCTGACT GGTATCTTCT GTGA
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| Protein sequence | MKPIIPEDER SKEPLDTDRV IYHPDMIRAN EWVLNEYEAP YRELCIFVPC AKRKPYHESP
SHKKFDRIIF GIAKPEDVHI VTFGTCGITP RELDTQYPFM HYSFMMGKCN VAKIKRDFIK
MESERLAAYL EKTRDNYKHR IAYCIGDFRT AMEKAVEMVD VEVDIVPRES TIQKMIQPDK
PFIYNSLSSR EYLQDFSDAI TDALKLPKRK VGLKEDLSVD DADWYLL
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