Gene Mbar_A3334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3334 
Symbol 
ID3626113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4280367 
End bp4280873 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content37% 
IMG OID637702167 
Producthypothetical protein 
Protein accessionYP_306792 
Protein GI73670777 
COG category[S] Function unknown 
COG ID[COG3431] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.129263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0637905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGTA TTAAACTATT TAAAAAGGTC ACTGATAGTA TCAGTATAAT TTTTCTTTAT 
ATACTACTGC TAGCTTTAAT TATGGGGATG GTAAAGACCT TACTGGATAT CCGTCTCATT
ATTTTTGAGT CTCTCGAAAG TGGATTCAGT CACATGGTAA CAAGTGTACT GACGGTTTTT
ATTGTTATTG ACCTTTTCAA AGCTTTTGTT GATTACCAGG AGAATGACAG GATCAGGCTT
ACGGATATCA CAGATGCCAC AATATTTATA GTCCTGCGTG AAATCGCTGT TGGCCTCTAT
TCAAAGGAAT TCGGGTATGA ATTTGTTTTA AGTCTGGCGG CTTTATTGTT TGTACTCAGT
ATAATGAGGG TGCTTGCTAT CAAATATTCC CCAACAAAAT CTCGGGTTCC TGGATCTTAT
AAAACTGCAC AGAGTGAAGG ACAAACTGCA AAACAAGGCG TTAATGCCGT CTTAGATAAA
TGCAAAACTG TCTCTGAAAG CAATTAA
 
Protein sequence
MDSIKLFKKV TDSISIIFLY ILLLALIMGM VKTLLDIRLI IFESLESGFS HMVTSVLTVF 
IVIDLFKAFV DYQENDRIRL TDITDATIFI VLREIAVGLY SKEFGYEFVL SLAALLFVLS
IMRVLAIKYS PTKSRVPGSY KTAQSEGQTA KQGVNAVLDK CKTVSESN