Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3334 |
Symbol | |
ID | 3626113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4280367 |
End bp | 4280873 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637702167 |
Product | hypothetical protein |
Protein accession | YP_306792 |
Protein GI | 73670777 |
COG category | [S] Function unknown |
COG ID | [COG3431] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.129263 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0637905 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAGTA TTAAACTATT TAAAAAGGTC ACTGATAGTA TCAGTATAAT TTTTCTTTAT ATACTACTGC TAGCTTTAAT TATGGGGATG GTAAAGACCT TACTGGATAT CCGTCTCATT ATTTTTGAGT CTCTCGAAAG TGGATTCAGT CACATGGTAA CAAGTGTACT GACGGTTTTT ATTGTTATTG ACCTTTTCAA AGCTTTTGTT GATTACCAGG AGAATGACAG GATCAGGCTT ACGGATATCA CAGATGCCAC AATATTTATA GTCCTGCGTG AAATCGCTGT TGGCCTCTAT TCAAAGGAAT TCGGGTATGA ATTTGTTTTA AGTCTGGCGG CTTTATTGTT TGTACTCAGT ATAATGAGGG TGCTTGCTAT CAAATATTCC CCAACAAAAT CTCGGGTTCC TGGATCTTAT AAAACTGCAC AGAGTGAAGG ACAAACTGCA AAACAAGGCG TTAATGCCGT CTTAGATAAA TGCAAAACTG TCTCTGAAAG CAATTAA
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Protein sequence | MDSIKLFKKV TDSISIIFLY ILLLALIMGM VKTLLDIRLI IFESLESGFS HMVTSVLTVF IVIDLFKAFV DYQENDRIRL TDITDATIFI VLREIAVGLY SKEFGYEFVL SLAALLFVLS IMRVLAIKYS PTKSRVPGSY KTAQSEGQTA KQGVNAVLDK CKTVSESN
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