Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3245 |
Symbol | |
ID | 3627722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4164000 |
End bp | 4164752 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637702081 |
Product | multidrug ABC transporter, permease protein |
Protein accession | YP_306706 |
Protein GI | 73670691 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family [TIGR01247] daunorubicin resistance ABC transporter membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.234725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0779856 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCGAGG TAATCTATAT CCTCTGGCTC AGGCAGCTAA AACACTACTG GCGCTCAAAA GCCAGGCTGC TGGGTTCTCT CGGGCAACCC CTACTCTTTC TGATAACATT TGGGTTCGGG TTCGGTCCAA TGTATTCAAG GGCAAGCGGA GGGGAAAACT ACCTGGATTT TCTTGCACCA GGGATTGTCT CAATGTCTAT TCTGTTTACT GCCATCTTTT CGGGGCTTGA GGTCATCTGG GACAGGCAAT TTGGCTTTCT CAAAGAGACT ATGGTAGCTC CGATCTCAAG AATAGAAATT ATGATCGGAA AAACTCTTGG GGGTGCAACC ATAGCCATGA TTCAGGGTCT GATCGTGCTG AGCCTGACAT ATCTACTAGG GTTCAGGATT CCGAGTCTTG CAAGTCTTGC TGTTGGGCTG GTTTTCATGT CCTTAATAGC TATCTTCTTT ACAGGCCTGG GCCTTGCCAT AGCCTCAAAA ATGAAAGATA TGCAGGGTTT CCAGCTGATC ATGAACTTCC TGATTATGCC TATCTTCTTC CTGTCTGGCG CCCTCTTCCC CCTCGAGAAC CTGCCGCAGT CGATCTATTT CATAAGCAGG ATCGATCCGC TTACCTATGG GGTAGATGGC TTAAGAGGAG CTATTGCTGG AATGAACGTG TTTGGCATCT ATAATGACCT GGCAATAATA GGTTTGCTCT CGGCTTTTGT CTGCATGATA GGAGCATTCC TGTTTTCAAA AATAGAGGCG TAA
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Protein sequence | MIEVIYILWL RQLKHYWRSK ARLLGSLGQP LLFLITFGFG FGPMYSRASG GENYLDFLAP GIVSMSILFT AIFSGLEVIW DRQFGFLKET MVAPISRIEI MIGKTLGGAT IAMIQGLIVL SLTYLLGFRI PSLASLAVGL VFMSLIAIFF TGLGLAIASK MKDMQGFQLI MNFLIMPIFF LSGALFPLEN LPQSIYFISR IDPLTYGVDG LRGAIAGMNV FGIYNDLAII GLLSAFVCMI GAFLFSKIEA
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