Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3225 |
Symbol | |
ID | 3627342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4141536 |
End bp | 4142192 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637702062 |
Product | cell surface lipoprotein |
Protein accession | YP_306687 |
Protein GI | 73670672 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00779237 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0523754 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCAACAA AAAAAATAAT TTTACTCCTG ATAGCCCTGT CAGTAATAAT ATCAGGCTGC TTGAGCTCGG AAGAGGAGAA GAAGAATGGG GAAGAAGACC GGGAGGCAGG CGGCAGTTCA GGAGGCTCGC AAAGACAAAG AGAAGTAAGA ACACCTGTAG GAATGCAGGA AGAAACGTGG ACTCCAGAAG AGACGGAAAC TGAAGGGGAA ACGTGGACAA CGGAAAAAAC GGAAACACAG GAAGAGTTTG AAACACCGGC AGAAATGGGA ACACAGGTAG AATTGGACAC TCTAGAAAAA GCAGAAATTT CTGGAATACC TAATAAGCCC GAGATGGAGC AAACAGAAGT CTGGAATGGG AAAGGGGGGC AAAATGGAGC CATCCAGCCT GGCGGAACCG TACCGACGTC ACACCTTGTG AGGCTTAAGA ATTATCTTAT GGTTCCTTCA AGCCTGAAAA TTAATATCGG AGATACGGTT GTTTGGAGAA ATTACCAGGA GTCCAGTGTT CTTACCCTGA CCAGCCAGGA GCACCTTTTC GAGGATAAAA GGCTCGCATA TGGAAATGCT CTGGAGTATA CGTTCAATGA GCCAGGAAGC TACAATTTCA GTGCAAAAGG ATATCCGAAA ATGCAGACGA CCATCACTGT AAAATAA
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Protein sequence | MATKKIILLL IALSVIISGC LSSEEEKKNG EEDREAGGSS GGSQRQREVR TPVGMQEETW TPEETETEGE TWTTEKTETQ EEFETPAEMG TQVELDTLEK AEISGIPNKP EMEQTEVWNG KGGQNGAIQP GGTVPTSHLV RLKNYLMVPS SLKINIGDTV VWRNYQESSV LTLTSQEHLF EDKRLAYGNA LEYTFNEPGS YNFSAKGYPK MQTTITVK
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