Gene Mbar_A3176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3176 
Symbol 
ID3626865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4088453 
End bp4088800 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content40% 
IMG OID637702015 
Productnitrogen regulatory protein P-II 
Protein accessionYP_306640 
Protein GI73670625 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00223348 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTAAAA TGTGCAAAAT CGAAGCAATA ATAAAGCCCA TGAAGCTGCA TGAGGTAAAA 
GATGCCCTTG AAGAAGCCGG GTATCCTAGC CTGACAGTAA CTGATGTCAA AGGACGTGGA
CAGCAGAAAG GAATCGTACA GCAGTGGAGA GGTAAAAAAT ATTGTGTGGA TCTTCTTCCC
AAAACCAAAA TAGAGATCGC AGCCCCTGAA GACAAAATTG AAGAGATTAT TAAAATTATT
CAGAGTTCAG CGTATACTGG AGAAATTGGA GACGGAAAGA TCTTTGTTAC CCCCATTGAA
ACTGTAGTTA GAATAAGAAC TGGAGAAAGA AATGGAGATG CTCTCTAA
 
Protein sequence
MTKMCKIEAI IKPMKLHEVK DALEEAGYPS LTVTDVKGRG QQKGIVQQWR GKKYCVDLLP 
KTKIEIAAPE DKIEEIIKII QSSAYTGEIG DGKIFVTPIE TVVRIRTGER NGDAL