Gene Mbar_A3082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3082 
Symbol 
ID3625213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3965120 
End bp3965647 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content49% 
IMG OID637701920 
Producthypothetical protein 
Protein accessionYP_306550 
Protein GI73670535 
COG category[S] Function unknown 
COG ID[COG4894] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.749144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.114182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACGAA TTATGGGCGG TCTCAGGGGC CGTGGAGAAG AAAGCATACA ACGCTACAAA 
ATGCACGAAA AACTTGTTTC CATAGGAGAT GACTACTGGA TAGAAAACGA AACTGGAGAG
AGGGAATTCT ACGTGGACGG CAAAGCTATC CGCCTGCGTG ACACCCTGAT TATCAGGGAT
GTGCAGGGTA ATGAGGTATA TAGACTCCAG GAGAAGCTTC TCAGGATAAA GGATACGATG
GGCATCCAGG ATGCGGATGG AAAAACAGTC GCAACGATCA AAAAAGCCCT GATCTCACCT
CTTCGCGACC GCTGGAAAGT TGAAGTGGCA AATGGGCCTG AGATGGATGT CCGAGGCAAT
ATTCTGGACC ATGAGTATAA GATTGAAGCC GGTAGGGAAA AAGTCGCAGA GGTCTCAAAA
AGATGGTTCC GGATAAGAGA TACCTATGGT GTAGAGATCG AGCCTGGACA GGACAGCGCA
TTTATCCTGG CGATTGCAGC TGCGCTTGAT CAGATGGCCC ACGATTAA
 
Protein sequence
MRRIMGGLRG RGEESIQRYK MHEKLVSIGD DYWIENETGE REFYVDGKAI RLRDTLIIRD 
VQGNEVYRLQ EKLLRIKDTM GIQDADGKTV ATIKKALISP LRDRWKVEVA NGPEMDVRGN
ILDHEYKIEA GREKVAEVSK RWFRIRDTYG VEIEPGQDSA FILAIAAALD QMAHD