Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3078 |
Symbol | |
ID | 3625209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3960266 |
End bp | 3960787 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637701917 |
Product | Na(+)/H(+) antiporter |
Protein accession | YP_306547 |
Protein GI | 73670532 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00966198 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.34465 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTGCTCT TCCTCTTTGG CCTTGCTTCC CGAAAGATCT CAGACACTGT AGTCACAGCC CCTATGATCT TTGTGGCAGC AGGAATGCTG CTCAGTCCAG AAGGACTTTA CCTGGTAAAT CTCTCTTCAA GCAGCACTTT TATTCTTAAT TTAGCTGAGC TGGCGCTTGT CCTGACTTTA TTTTCGGATG CCTCAAAAAT TGATTTGCAG GCACTATTGC GTGAAGAAAA ACTTCCAGGC CGGCTTCTAC TTATTGGCAT GCCGCTTACA ATAGTCTTTG GAGCTATTAT TGCTGCTTTT CTTTTTAAGA ATATAACACT TGCAGAAGCA GGTCTTATAG GAGTTATGCT TTCTCCTACC GATGCAGGGT TTGGTCAGGC GATAGTTAAC AATAAAAAAG TATCTGAAAA ACTGAATACG GTAATTTATA AGGCTCTAAT AAATGCAAAT ATAGCAATGC CTTCTTCTGA CATCGTTGTT CATTTTGCTA ACCAGAAAAC TGAGTTAACA GCTTCCGAAT AG
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Protein sequence | MLLFLFGLAS RKISDTVVTA PMIFVAAGML LSPEGLYLVN LSSSSTFILN LAELALVLTL FSDASKIDLQ ALLREEKLPG RLLLIGMPLT IVFGAIIAAF LFKNITLAEA GLIGVMLSPT DAGFGQAIVN NKKVSEKLNT VIYKALINAN IAMPSSDIVV HFANQKTELT ASE
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