Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3002 |
Symbol | |
ID | 3626664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3865594 |
End bp | 3866298 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637701846 |
Product | hypothetical protein |
Protein accession | YP_306476 |
Protein GI | 73670461 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.407926 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0038842 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTATGT ACTATAGTGT ACAGATTATG ACAATTGTAT ATCCTGATAT CAAGCCATGG GGACGGTCTT TCAAAGAATA TGTCAGAATG TTTAACTTAA CACCTGATGA TCTCGAGCGA AAGATCCTGG GCTGTGGAGA CGGACCTGCA AGCTTCAATG CAGAGTTTAC AGAACGAGGC GGAAATATCA TATCAGTTGA CCCTGTCTAC TTTTTCAGTG CTGATCAGAT TAGACAGAGA ATTCATGAAA CCTATAATTA TATCATTGAC CAGACCCGGA AAAACCAGGA TAAATTTATC TGGCAAGAAA TTGGCTCAGT TGAAGAACTC GGAAGGATAA GGATGTCGGC TATGGAGAAA TTTCTAAAAG ATTTTTCGGA AGGCGTGATG CAAAAAAGAT ATATACCGGG TGAACTGCCC TTTTTGCCTT TTAAGGATAA AGAGTTTGAT CTGGCATTGT GCTCGCATTT ATTATTTCTC TATACAGATA ACCTGTCACT GGAGTTTCAT TTAAAATCGA TAGAGGAGTT GTGCAGGGTT TCAAATGAGG TAAGAGTATT TCCGTTACAA GACGTAAACG CCGACCGATC ATCATATGTT GAGCCTGTAA TCAATTTTTT ACGGACAAAA AACCAAGATG TAAAGGAAAT AAAGGTAGCA TACGAATTTC AAAAGGGTGG AAATACAATG TTAAGAATTT GTTGA
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Protein sequence | MSMYYSVQIM TIVYPDIKPW GRSFKEYVRM FNLTPDDLER KILGCGDGPA SFNAEFTERG GNIISVDPVY FFSADQIRQR IHETYNYIID QTRKNQDKFI WQEIGSVEEL GRIRMSAMEK FLKDFSEGVM QKRYIPGELP FLPFKDKEFD LALCSHLLFL YTDNLSLEFH LKSIEELCRV SNEVRVFPLQ DVNADRSSYV EPVINFLRTK NQDVKEIKVA YEFQKGGNTM LRIC
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