| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2940 |
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| Symbol | |
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| ID | 3626139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 3770888 |
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| End bp | 3772498 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637701785 |
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| Product | hypothetical protein |
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| Protein accession | YP_306415 |
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| Protein GI | 73670400 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5421] Transposase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0019616 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00741798 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTCTCT CTCCCAGCTC TGAATCCACA ACTCATCTTG GTCATTATGG TCTTATTGCT
GGCGTATTTG ACGAACTTGA AATTTCAGAT TTGATTGACA CTCTTCTTCC TAAGAAAAGT
GGCCATAACA TTTCTCATTC TACTGTTCTT AAGGCAATGT GCATTAACGG TTTAGGATTT
ACTGAACGTC GTCTTTACCT ATTTCCTGCT TTCTTTGAAA ACTTGCCCAC TGAAAGGTTA
CTGGGAGAAG GTGTTCTCCC AGAACACCTT AATGATGACG TTTTTGGCAG AACTCTGGAC
AAAATCCAGG AATATGGAGC AACCGAAATC TTCAATCATA TAATTCTGCA AGCCATGAAA
CACGTTCCTA TTAATCCTCG TTTTTGTCAT TCAGATACTA CAAATTTCAG TGTTTATGGT
GACTATAAAA ACGATGATAA CGGCAAAACT ATCAACATTA CTTATGGTCA TCCTAAAGAT
AAGAGAGTCG ATTTACTTCG TTTTTCTATT TCTATGGTTA CTGATCAGAA AGGAATTCCT
CTGTTTGTGA GAGCGTTAGA TGGTAACAGT TCCGATAAGA AAGTTCTCAT CAAAACCATA
AAGGAAGTAA CACAGAACCT GAATCTTGAT CAGAGAGTCT ACCATATTGC AGACAGTGCA
TTTTATACTG AAGATAATGT CAAAGAGATA GGAACTAACG CTTTTTTCAT CTCGAGAGTA
CCTGCAACCA TCAATGAATC AAAGGAATTA TTGATGACAG ACTTAATTCT GGAAACATGC
TCTGATGAAC GTTATTCTTG TTCTGCTGTA AAATCCTGTT ATGGTGGAGT AGAACAGTTA
TGGGTTGTAT TCTGTTCAGA GGAAATGAAA AAGAAGGAAG AGAAGAAATT TGATGAAAAG
ATTCTCAAAG AGCTTGAAGC AGCAGAAAAG TCTCTTAAAA AGCTTTCTAA TCATGAGTTT
GCTTGTGAAG CAGACGCAAG AATGGCTGCT GAACAATGGT TGAAAGAGAA TGAACTGTAT
GAATTCCAGA AACTTGAAAT AAAAACTAAG TCACACAGAC TTGAAAACAA GAAAGGAAGA
CCAAGGAAAG GTGAAGATGT ACAGACTTTT TACCTGATAG AAGCAGAGAT AAAACACGAC
CAGGAGAAAG TACAGGAAAA AAGAGCAAAG TTAGGAAGGT TCATTCTTGC AACCAATGAT
CTGGAGTTGA CTCCAGATCA ACTCCTAAAG TACTATAAAG AACAGGGAAC AGTTGAAAGA
GGGTTCAGGT TCCTTAAAGA TAAGAGTTTC AGAGTGTCTG AGGTGTACCT GAAAAAAGAG
TCCAGAATAG AAGCACTTGC AATGGTAATG GTTCTGTGTT TGTTATTGTA TTCAATAGCT
GAATGGAAAC TGAGAACAAG ATTGGAGGAA ACAAAAGAAG CTATTAGAAA CCAAGTAAAG
AAGAAAACAC AGACTCCAAC AATGAAATGG GTATTCTTTC AGTTCAGGAG AATAACAGAG
TTAGAGATCG AAATTGAGGG AAAGAGGATA AAGAAGGTAT TAAATCTGGA TGAAGAAACA
ATTAAAGTGC TGAGATTGAT GGGAGAAAAA TACGAAAAAT ATTATATGTG A
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| Protein sequence | MTLSPSSEST THLGHYGLIA GVFDELEISD LIDTLLPKKS GHNISHSTVL KAMCINGLGF
TERRLYLFPA FFENLPTERL LGEGVLPEHL NDDVFGRTLD KIQEYGATEI FNHIILQAMK
HVPINPRFCH SDTTNFSVYG DYKNDDNGKT INITYGHPKD KRVDLLRFSI SMVTDQKGIP
LFVRALDGNS SDKKVLIKTI KEVTQNLNLD QRVYHIADSA FYTEDNVKEI GTNAFFISRV
PATINESKEL LMTDLILETC SDERYSCSAV KSCYGGVEQL WVVFCSEEMK KKEEKKFDEK
ILKELEAAEK SLKKLSNHEF ACEADARMAA EQWLKENELY EFQKLEIKTK SHRLENKKGR
PRKGEDVQTF YLIEAEIKHD QEKVQEKRAK LGRFILATND LELTPDQLLK YYKEQGTVER
GFRFLKDKSF RVSEVYLKKE SRIEALAMVM VLCLLLYSIA EWKLRTRLEE TKEAIRNQVK
KKTQTPTMKW VFFQFRRITE LEIEIEGKRI KKVLNLDEET IKVLRLMGEK YEKYYM
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