Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2922 |
Symbol | |
ID | 3626507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3743002 |
End bp | 3744249 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637701767 |
Product | formylmethanofuran dehydrogenase, subunit B |
Protein accession | YP_306397 |
Protein GI | 73670382 |
COG category | [C] Energy production and conversion |
COG ID | [COG1029] Formylmethanofuran dehydrogenase subunit B |
TIGRFAM ID | [TIGR03129] formylmethanofuran dehydrogenase subunit B |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.113805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00114048 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGAGAAAA ACTATCATGT ATGCACAGGC TGCGGCCTCC TCTGTGACGA TATTGAGGTT GAGTCCGAAA ATAACAGTGT GAATAAAGTT TATACAGCCT GCAGAGTAGG AGTCGCCCAT ATGAAAGAAG CAAGAAAGGG CGAAGCAGAT TTTCTGGTTG ATAATAAGCC TGTAGATGAA GCTACTGCTA TCAGTGAGGC TGCATCAATC CTTAAAAATG CCAGAAATTC TTTGATCTTC GGGCTTGGGA CTTCTACCAG TGAAACCCAA AAAATAGCAA TTGAGCTTGC AAAGAAAATC AACGCCACTC TTGATGATAC CTCCTCGTTC TGCCTGGGTC CTCTAGCTGA GGCTCTCATT CAGGATAAGC TCAAGAGCTG TACTCTTGAC GATGTAAGGA ATAAAGCTGA TGTTATCATA TACTGGGGAA CAGATCCATC GGACTCTCAT CCTCGCCTTC TTTCGAAGCA TTCCTACTTC CCCAGAGGAA CCGAAAAGCA GAGAGGCTGG GAAGAAGAAA GGACAGCCAT AGCAATCGAT GTTCGAAAGT CCCATACCGC AAAGATCTGC GGGAATTATT TTTACCAGAT TCCTCCAAAA GGAGATGCAG AATTTATCGA TGCCATGATT GCAGGGCTTT CGGGAAAGCT TCCCAAAACC TCCTATAATT ACCCGCCTAA AAAAATACTT GAGCTGGCAA ACATCCTTAA AGGAGCAAAG TTCGGCGTAA TCTTTGTAGG ACGCGGGCTC ATCTACTCGC TTGAAAACCT TGAACCTCTT TTCAAGCTTA TGAAAATCCT GAATGAGAAA GCAAATTTCC ACCTCATACC AATGGTAAGC AGCTCTAATA CAATGGGCTT TAACGAAAAC CTCTTTGCAG AAACTGGATA TGTGAATAGT GTAAAGTTCG AAAACGGGAC TGCAAAGCAT GGGCCCGAGT ACTCAGTTGT TGAGTCTCTT AAAGCAAAAA CTGTGGATGC AGCTCTTATA ATAGGTTCGG ATCCGCTTTT ATTCCTTCCC GGATCTATTG CAAAGAACAT GCTGGAGATT CCTGTTATCT CGATGGATCA TTGTGAAACC CTGACTTCAA AGCACTCAAA GGTCTACATC AATACCGCAA TAAACGGGGT AGAGGCAGGG GGAAGTTCCA TACGCATGGA TAGAGTTAAA GTGAGCTTTG AGCCTGTTAT TGAGACAAAT CACCCGTCTG AGGACGTAAT TCTCAAGAAA ATAATGGAGG CACTCTGA
|
Protein sequence | MEKNYHVCTG CGLLCDDIEV ESENNSVNKV YTACRVGVAH MKEARKGEAD FLVDNKPVDE ATAISEAASI LKNARNSLIF GLGTSTSETQ KIAIELAKKI NATLDDTSSF CLGPLAEALI QDKLKSCTLD DVRNKADVII YWGTDPSDSH PRLLSKHSYF PRGTEKQRGW EEERTAIAID VRKSHTAKIC GNYFYQIPPK GDAEFIDAMI AGLSGKLPKT SYNYPPKKIL ELANILKGAK FGVIFVGRGL IYSLENLEPL FKLMKILNEK ANFHLIPMVS SSNTMGFNEN LFAETGYVNS VKFENGTAKH GPEYSVVESL KAKTVDAALI IGSDPLLFLP GSIAKNMLEI PVISMDHCET LTSKHSKVYI NTAINGVEAG GSSIRMDRVK VSFEPVIETN HPSEDVILKK IMEAL
|
| |