Gene Mbar_A2875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2875 
Symbol 
ID3627256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3684067 
End bp3684486 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content39% 
IMG OID637701725 
Producthypothetical protein 
Protein accessionYP_306355 
Protein GI73670340 
COG category[R] General function prediction only 
COG ID[COG3291] FOG: PKD repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.684697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.334208 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA ATGGAAAGTT TATAACGATA TCTGTTTTCA CCGTATTAAT GATGTTGACT 
TTATTGTCTA CAGCAGCCTC TGCATCAGTT TATACGTACA AAACTCCCCT TGGTGCAGGA
ACTCCCCCAG CAACACAACG TCTAACTGGT GGAGGTAATT ACATTGATTA TACGGCAGTA
GCCGCTTCGA GTACTGATCC GCGAATAGTA CAATTCAAGG ACCTGTCAAA AGGTAAAGAG
ACATATATCA GATGGGACTT TGGAGATGGA ACCTATAAGC AAGGGACAAC AATTACTTCA
TCATTAAAAA ATCCGGTACA CAAGTTTTCA AAGACTGGTT ATTATATTAG TTGCATGACT
ATCAAGTGCA CTGGTTATAA TGGGAAGCTG TGGGTTCATA AGACCCTTAT TATCAGATAA
 
Protein sequence
MKNNGKFITI SVFTVLMMLT LLSTAASASV YTYKTPLGAG TPPATQRLTG GGNYIDYTAV 
AASSTDPRIV QFKDLSKGKE TYIRWDFGDG TYKQGTTITS SLKNPVHKFS KTGYYISCMT
IKCTGYNGKL WVHKTLIIR