Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2793 |
Symbol | |
ID | 3625121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3565091 |
End bp | 3566815 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637701644 |
Product | hypothetical protein |
Protein accession | YP_306274 |
Protein GI | 73670259 |
COG category | [S] Function unknown |
COG ID | [COG1572] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.430464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000384805 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGTTAA AGAGCAGTAA GTTGAACAGG TTTTTACTGT ATGCTGCAGG AACTTTAATC ATTTTTATGT ATGTTTCTCC TTGCCTGGCA ACTTACAATT TCGAAGGTAT TCCTGAACAG GATGAATTGA TTGAAGCTAC ATCAGGGACG GTAAAAGGTG GGCTTTACGT TGATGGGGGT GAGGGGCTTA AGGAGACTCC TTATGTGCAG GAATTCAATG TTCCGGGAGA TTCTGTAAAA TGGGCCAGGG CATATGTGGG AGTCTGGGGC GGTACAGAAA AAAAAACTGG AACTCTGGAT TTTACTGTCA ATGGGAAAGA TTTCGAAAGC GTGGATCTTG AAGGTGAAGC AGATAAGGGA GATGATGAGG GTCAGAATCC CTCAATATAT TGTACTGGAC ATGGGGTATA CTGGGTAGCT TATGACGTAA GCACGAATAT AAGTACCGGA CCTGTAAAAG TGGAAGTAAA AACTGAAGGG GACATTGATG GCAGAATATA TGGTATAATC CTTGCTGCTG TATATGAAGA TAAAGACGGA GAAGATACAA AGTACTGGAT AAAGGAAGGA AACCTGAATC TTCACGGCGA AGGATGGAGT GGAGATCTGG CATCAACGCA TGATGAAGGA TATGCCGAAT TTTCGGGAAA TATAGATACT GATAAGTACA AAACTGCAAC CCTTGCTGTA GCCTACCTAT GCGGCAGCCC AGGACTTGAA GACTCTCTCT ACTTTAACGA TGAACAACTT TCGGATGGAG ATAACAAAAA CGATATTGCA AATTCAAGAA GTTATTTTGA TCTAAAATTC TTTGATGTAC TGGACTTTCT TACGGAAGAT GACAACGAAG TCAAGTTCCA AAGAGACGAT GAAGATTATG TCCATCCTGT ACTGGCCGCG CTAACTTTGG GAACGGAAGA AGCTGGAAGC TCTTCTGACC TTATAGTCTC CAGACTTACT TTACCTGTGC TCTGCGCAGG TGAAGATAAT GTCATCAAGG CAAACATTAA AAATATCGGA AAAGACTCAG CAAGTAGTTT TCAGGCAGCA CTTTATGCTG ATGATGAAGT CGTATCCACT GCTACCGTAT CTTCTCTTGC TAGTGAAAAA AATAAAACTA TAGAGTTTAA CTGGAAACCT GCCAGTGACG GACAGAGGGC TCTAAAAGTA TATGTCGACT ACGTAAACAA AATAAAAGAA AAATGTGAAG TAAATAATTA CAACGTTCCT GTTCTTGCTA AGGTTATCGA TATAACTCCA CCCGAGATTG AAATAAAATC ACCGGAAGAC GGAAGTTTCG TAGATGCTGG AGAGATAACT GTAAGCGGAA CGGTTGAAGA CACAAGTCGA AACTTAACAG TGGATGTGAA CGGAAAGAAA GCACTGCTTT CAGGTGGGAG CTGGAGCGCA AAAGTTCCTT TAGCTTCAGG GCCTAATGTA ATAGCTGTTT GCGCGATGGA CAGAGCAAAT AACACAGCAA AAGAAGTTAT TGTTCTCAAC CGAAAAGCTT CTTTCCTGCG TGACTTTAAT GAATCTTCCA GGTCTATGAA TCAAAATAAC ACAAAATCTG CCAATGAAAC ATTTCAGATT TCCCGGCATA AAGACCTGTC ACAAAATAGA ATATATCTAT TTTTCAAAAA ATTGATTTCT AATTGGTGGG ACGAGGTTGA AAATCGAAGC ATACAATCGG AACCTTTACA TAGATTATTC TATGACGGAT CCTAA
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Protein sequence | MLLKSSKLNR FLLYAAGTLI IFMYVSPCLA TYNFEGIPEQ DELIEATSGT VKGGLYVDGG EGLKETPYVQ EFNVPGDSVK WARAYVGVWG GTEKKTGTLD FTVNGKDFES VDLEGEADKG DDEGQNPSIY CTGHGVYWVA YDVSTNISTG PVKVEVKTEG DIDGRIYGII LAAVYEDKDG EDTKYWIKEG NLNLHGEGWS GDLASTHDEG YAEFSGNIDT DKYKTATLAV AYLCGSPGLE DSLYFNDEQL SDGDNKNDIA NSRSYFDLKF FDVLDFLTED DNEVKFQRDD EDYVHPVLAA LTLGTEEAGS SSDLIVSRLT LPVLCAGEDN VIKANIKNIG KDSASSFQAA LYADDEVVST ATVSSLASEK NKTIEFNWKP ASDGQRALKV YVDYVNKIKE KCEVNNYNVP VLAKVIDITP PEIEIKSPED GSFVDAGEIT VSGTVEDTSR NLTVDVNGKK ALLSGGSWSA KVPLASGPNV IAVCAMDRAN NTAKEVIVLN RKASFLRDFN ESSRSMNQNN TKSANETFQI SRHKDLSQNR IYLFFKKLIS NWWDEVENRS IQSEPLHRLF YDGS
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