Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2709 |
Symbol | uvrC |
ID | 3624457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3439130 |
End bp | 3440689 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637701563 |
Product | excinuclease ABC subunit C |
Protein accession | YP_306193 |
Protein GI | 73670178 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.890107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0209335 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGACC TGGAGGCTCT TCCTCACCTG CCTGGCTGTT ATCTTTTCAA GAATGAAGAA GGGACTGTGA TTTACGTGGG CAAGGCAAAG GACCTCAAAA AGCGGGTAAG CAGCTATTTC CAGAAACGAG AACATGACCC AAAAACCGCG AGCCTTATAG AGGCTGTAAG GGGCTTTGAT TTTATTGTCA CGAATACGGA AGTAGAGGCT TTCCTTCTTG AAAACACCCT TATTAAGAAA CACTGGCCAA GGTACAACAT TCTTCTAAAA GACTCAAAGC GGTATGCCTG TATTCACTTA ACAGAAGAAA AGTTTCCAAG GATCAGGCTT TCCAGGAAAA AGGCAGACAA CGGAAGCTTT TTTGGGCCCT TTGTCTCGGC AAAGGAAAGA GACTACATTT TTGAGGTTGT AAGAAAGACC TTCCAGCTCC GGACCTGCAA AAAGATGCCG AAACGGGCCT GCCTTAGATA TCATATAGCG GCATGCAGCG GGCCCTGCAT AGGTGCAATT TCCGCGGAAG ACTATGCCGA GAAAGTGAAA AAAGCGGCTT CAGTCCTGAA AGGCAATATC AGAGAGCTTA TCGAGTCTAT GGAAAAAGAT ATGAGAGAAC TGGCATCGAG GCAGCAGTTC GAGCAGGCCA TGGCTCTCAG GGACGAGATT GCAGCCCTTG AGTATCTTCA GGAAAAACAA AATATGGAGA GGCAGAAAAA GCATAATGAG GATATTCTGA ACTACATTGT CAGGGATGAT ACTGTTTATC TCATGCTCTT CAAGGTCTAC AAAGGTACGC TTGAAGATAA GCAGGACTAT GTTTTTGCCT TTGGGGAAAA TTTCCTGGAA GAATTTCTTG TACAATATTA TTCCGAGAAC GAACCTCCTG AAGAACTGAT TCTTCCTGAG CCTCTTGAAG AATCGCTTGT TGATTTCCTT TCTCACGTCA AAGGAACAAA AGTCAAAGTT ACGGTTCCGA AACAGGGAGA GAAAAAGGAA CTTCTCGACC TTGCCCTGAA AAATGTTGAG ATAGGTTTCT TTGGAGACCG GAAAAAGCTC GAAGCCTTGC AAAGTAAGTT ATCTCTTCCG AAACTTCCGA ATGTCATAGA ATGTTTTGAT ATTTCTCATC TCTCAGGTAC GTCTACTGTC GGTTCAATGG TTCAGTTCCG GGGTGGCAGA CCTGATAAAC ACAATTATCG TCGCTTCAAG ATCGAGAGTG TTGAAGGAAT CGATGACTTC GCTTCCATTG CAGAGGTTGT ACGCAGGCGT TATTCCCGTT TGCTCGAGGA CAAACATGAC CTGCCTGATT TGATTATTAT AGACGGGGGA AAAGGACAGC TCTCTTCAGC TTTTCAGGAA CTCAGAAAGC TCAAAGTCAG AGTTCCTCTT ATCTCAATAG CCAAGCGGGA AGAAGAAATC TATGTGCCCG GAATCAAGTC TCCTCTTCCA ATAAAAAAAG AAGAGAAAGC CTCTCTTTTT GTCCAGGAGA TCCGGGACGA AGCCCACAGG TTTGCAATTA CCTACAACCG CCTGCTGAGG CAAAAATCTA TGATTCCTAA AAATGATTGA
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Protein sequence | MIDLEALPHL PGCYLFKNEE GTVIYVGKAK DLKKRVSSYF QKREHDPKTA SLIEAVRGFD FIVTNTEVEA FLLENTLIKK HWPRYNILLK DSKRYACIHL TEEKFPRIRL SRKKADNGSF FGPFVSAKER DYIFEVVRKT FQLRTCKKMP KRACLRYHIA ACSGPCIGAI SAEDYAEKVK KAASVLKGNI RELIESMEKD MRELASRQQF EQAMALRDEI AALEYLQEKQ NMERQKKHNE DILNYIVRDD TVYLMLFKVY KGTLEDKQDY VFAFGENFLE EFLVQYYSEN EPPEELILPE PLEESLVDFL SHVKGTKVKV TVPKQGEKKE LLDLALKNVE IGFFGDRKKL EALQSKLSLP KLPNVIECFD ISHLSGTSTV GSMVQFRGGR PDKHNYRRFK IESVEGIDDF ASIAEVVRRR YSRLLEDKHD LPDLIIIDGG KGQLSSAFQE LRKLKVRVPL ISIAKREEEI YVPGIKSPLP IKKEEKASLF VQEIRDEAHR FAITYNRLLR QKSMIPKND
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