Gene Mbar_A2665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2665 
Symbol 
ID3624775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3375000 
End bp3376340 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content35% 
IMG OID637701521 
Producttype I restriction-modification system specificity subunit 
Protein accessionYP_306151 
Protein GI73670136 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0650221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.332066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGAG TAAATACATC AAATTCTTGG AAAAAAGTTC CAATAAAAAA TTTGTACTTG 
GGTTTATATG ATGGACCTCA TGCTACGCCT AAACCTTCTT TGAGTGGACC AATATTTTTA
GGAATAAAAA ATATTACTGA AGATGGTAGG CTAGATTTAT CTCAAATTAG GAACATCTCA
GAAGATGATT TTCCAAAATG GACAAAAAGA GTTCTTCCAA CAGAGGGAGA TATAGTATTC
AGCTATGAAG CTACGTTAAA TCTCTATGCA ATGATTCCTA AAGGGTTTCG AGGATGTCTT
GGTAGAAGGC TTGCACTTAT AAGACCCGAT ACTGAAATTG TAAATCCAAA ATTCTTGTAC
TATTCTTTTT TTGGAGAAGA ATGGAGAAAT ACTATCTCTA AAAATTTAAT TTCTGGTGCA
ACAGTTGATC GAATTCCTCT TATAAATTTT CCAAACTTTG AAGTTTCTAT ACCTATTCAT
TCAATCCAAA GAAAAATCGC CTCCATCCTC TCTAATTATG ATAATCTTAT CGAAAACAAC
ACCCGACGAA TAGAAATTCT TGAACAGATA GCAAAGCTGG TGTACGAAGA ATGGTTCGTT
AAGTTCAGGT TTCCGGGGCA CGAAAATGTA GAAATGGTAT CTTCGGAATT AGGGGAGATT
CCGGAGGGGT GGAAAGTAGA AAAATTATCT GAACTGGTCA AAACACAATA TGGATATACA
GAAAGTGCAA CCGAAGAAGA AATTGGCCCA AAGTTTTTGA GGGGTAAAGA TATCAATAAA
CAGTCATACA TTTCCTGGGA CGAAGTGCCT TTTTGTTCGA TTTCTCCTGA AGTTTTAGAT
AAATATCTCT TAAAGAAAGG AGATATTGTT GTTATAAGAA TGGCCGATCC CGGTAAAGTT
GGAATTGTTG AAACAGAAGT TAATGCTGTA TTTGCTTCTT ACTTGATAAG ACTGGAAATA
ATTAAAAATA TCAAGCCTTA TTATTTGTTT TACTTTTTAC AGTCAGACAA ATTTCAAAAT
TATGTAATCG CTGCATCGAC AGGGACTACC AGAAAAAGTG CCAGTGCAGG TGTAATTACT
AACATTGACT TAATAATTCC ACCTGAATAC TTATTAACAT TATTTGAAGA TAAAATTGGA
CTTCTTAGAA AGCAATTGAA TATATTAATT AACAAAAACC AAAATCTCCG CAAAACCCGC
GACCTTCTTC TCCCAAAACT CATTTCAGGA GAAATCGACG TTTCGGATCT GGATATTAGC
ATAAGAAATG AGTATCAGGA GCATAATATT AATTTTGGAG AGCCACAAGA TGAGGAAGGA
CTCAGATCTA AAATGGGCTG A
 
Protein sequence
MPRVNTSNSW KKVPIKNLYL GLYDGPHATP KPSLSGPIFL GIKNITEDGR LDLSQIRNIS 
EDDFPKWTKR VLPTEGDIVF SYEATLNLYA MIPKGFRGCL GRRLALIRPD TEIVNPKFLY
YSFFGEEWRN TISKNLISGA TVDRIPLINF PNFEVSIPIH SIQRKIASIL SNYDNLIENN
TRRIEILEQI AKLVYEEWFV KFRFPGHENV EMVSSELGEI PEGWKVEKLS ELVKTQYGYT
ESATEEEIGP KFLRGKDINK QSYISWDEVP FCSISPEVLD KYLLKKGDIV VIRMADPGKV
GIVETEVNAV FASYLIRLEI IKNIKPYYLF YFLQSDKFQN YVIAASTGTT RKSASAGVIT
NIDLIIPPEY LLTLFEDKIG LLRKQLNILI NKNQNLRKTR DLLLPKLISG EIDVSDLDIS
IRNEYQEHNI NFGEPQDEEG LRSKMG