Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2408 |
Symbol | |
ID | 3626363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3042133 |
End bp | 3042810 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637701276 |
Product | hypothetical protein |
Protein accession | YP_305908 |
Protein GI | 73669893 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.29957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.291609 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAATAA AGAAAAAATT TGGAATAAGT GCAATATTTG CAACAATATT ACTGACATCC ATCTTGTCGG CGTCGATAGC AAGTGCACAA GGAAATGAGA CCACACAAGA AAATATGAAT ATGGAGCTTA CTTTTGGCCC AGAAACTCTT GATAAACTGA AAAATGATCC ACATTGTGTT GCTGCATATG GAAGCATACC AGCTTTTACA ACTTCGGAGG AGAGATATCA ATGGATTGAC ACTCTCGGTA ACATACTGGA CAATTTATAT AATGCAAATT TTATGCAAGA CCAAGAAAAT TTGAAGTATT TTGATCCATT TGGCCCTATT AAAACTTCTG GTGTGTCCTT TGATGGTGTT ATAGAGATAA GTATTAACAA TAGTTCAAAA GTTGATATGC CTTTGTTGGA CGAATTCTAT CAGCTTATTG ACACAAAAGC AAGCAGCATA GGGGTTAAAG AAGTTCCTGT AGTGTTCATG CGCGAAGATA ATCTACCTCT AGATGATCTT GAACCTCTAA GCTCGACGGA GAATGATGAA AACTCTGTTA ATGATAGTAT TTCTAACATA AACGATTCGA ATGAAAATAA ATCTAGTAAG GTTAACTCAA CTCCAGGTTT CGAATTATTG GGAAGCCTGG TTTGCCTATA CGGTGGCTGG AAACTCAGGA AAAAGTAA
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Protein sequence | MIIKKKFGIS AIFATILLTS ILSASIASAQ GNETTQENMN MELTFGPETL DKLKNDPHCV AAYGSIPAFT TSEERYQWID TLGNILDNLY NANFMQDQEN LKYFDPFGPI KTSGVSFDGV IEISINNSSK VDMPLLDEFY QLIDTKASSI GVKEVPVVFM REDNLPLDDL EPLSSTENDE NSVNDSISNI NDSNENKSSK VNSTPGFELL GSLVCLYGGW KLRKK
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