Gene Mbar_A2100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2100 
Symbol 
ID3625715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2650514 
End bp2651296 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content49% 
IMG OID637700976 
Productribulose-1,5-biphosphate synthetase 
Protein accessionYP_305611 
Protein GI73669596 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1635] Flavoprotein involved in thiazole biosynthesis 
TIGRFAM ID[TIGR00292] thiazole biosynthesis enzyme 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTTG ACGAAGTCAT AATCACAAGG GCAATTTTTG ATGAGTACTC TAAAACCTTC 
CTTGACTACA CGGAAGTTGA TGTGGCACTT ATAGGAGGAG GGCCTGCAAA CCTGGTAGCC
GCTAGGTATC TTGCAGAGGC AGGAGCAAAG GTTGCCATTT ACGAACAAAA GTTATCGCTC
GGGGGCGGTA TGTGGGCTGG AGGCATGATG TTTCCGCGTA TCGTTGTACA GGAAGAAGCC
TGCCGCATCC TTGACGACTT CGGGATCAGG TATAAAGAGT ATCAGCCTGG GTACTATGTG
GCGAATTCCG TAGAGTCCGT TGGGAAGCTT ATTTCAGGAG CAACTTCAGC TGGAGCTGAG
GTTTTCAACC TTGTGAGCTT TGAGGATGTA ATGATTCGGG AAAACGATAG GGTTACCGGA
ATCGTCGTCA ACTGGGGGCC GGTCACGGTA CAGCGCCTGC ACGTTGATCC TCTCATGATC
CGAACAAAAC TCGTAATTGA CGGGACAGGG CATGAAGCTG TTGTATGCAA TACAATTCTC
AGGAAAATTC CCAATGCAAA AATCGGAAAC CTCGGAAAGC TCGGAGAAAA ACCTATGTGG
TCAGAGGTTG GCGAGCAACT GGTTGTTGAT GCAACCAAGG AAATTTATCC GGGCCTGATC
GTTGCGGGCA TGGCTGCAAA TGCCGCAACC TGCTCCCCAA GAATGGGCCC AGTTTTTGGA
GGCATGCTTC TCTCGGGAGA AAAGGCTGCA AAACTTGCCC TTGAAAAGCT TAAGGAACTC
TGA
 
Protein sequence
MELDEVIITR AIFDEYSKTF LDYTEVDVAL IGGGPANLVA ARYLAEAGAK VAIYEQKLSL 
GGGMWAGGMM FPRIVVQEEA CRILDDFGIR YKEYQPGYYV ANSVESVGKL ISGATSAGAE
VFNLVSFEDV MIRENDRVTG IVVNWGPVTV QRLHVDPLMI RTKLVIDGTG HEAVVCNTIL
RKIPNAKIGN LGKLGEKPMW SEVGEQLVVD ATKEIYPGLI VAGMAANAAT CSPRMGPVFG
GMLLSGEKAA KLALEKLKEL