Gene Mbar_A2052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2052 
Symbol 
ID3626389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2593578 
End bp2594513 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content43% 
IMG OID637700930 
Producthypothetical protein 
Protein accessionYP_305566 
Protein GI73669551 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.368347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGGAA AGGCTATTAA ATTTACCAGT GTGTTCATCA CTTTATTAAT ATGTTTGATG 
ATAATTGGAA CAGTGTCCGC AAAAACTTAT GATAGTGAAA ATGCCAGCAC CTTAGAGGAT
TGGCAGTCTG TGGAAAAAGC TATGGGTGAA AAGGGCAATG TCAGTCCGGA TGGTGCCATA
ACGTTTGCAA TACCAATGAC TTTGAATGTA ACACTTGATG GCATAAAACT GAATCCGGCC
TCTGAACGCT ATCATGAATT TGATTTCATG AGAGCTGGAG ATAAGGCAAT GATGGTCGGT
GAAATAGGAG TTACGGAAGA GGAAGTGAAA AATGTATCAG ATATGGTTCT TCAGTCAGGA
TTGCAGGTGA CTGCGATACA TAACCATCTG CTACGCACGT CACCGCATAT AATATGGATA
CACATATACG GTTATGGTGA TCCTGCAGAT ATGGCTAAGA AGATACGCAA TATCACAGAT
TATGTTAACA GGGGTTCATC TGCCAGTGAA AGTGAGAAGT TCCAGAGTAA GGGAATTAAT
ACCACCGAAC TTGATCGGAT TATTGGAGAT AAAGGCTCGG CCGAAGGAGG AGATTATAAC
TACGAGATAC CCAGAGCTGA TAAAATACAG ATGAATGGCT ATACGTTGTC TCCGGTTATG
GATGTATCAA CTCCGATAAG TTTCCAGCCT CTTGGCAAGG GTAATGCGGC AGTTATCGGC
GAATTCGCAC TGGAAGAAAA TGAAGTTGAG CCTGTAGTAC GCACATTGAC AGCCAATGGC
ATTGAAGTTA CAGCTCTTCA CAGCCACATG ATAACCGAGC AGCCACGGCT ATTCTACGTA
CATTGCTGGG CTACAGGAGA TGCCGCAGAA CTCGCAGGTA TCATGCGTGA AGCTCTTAAT
GAAACAAATA TTAAGATCGG AAGCGAGAGT TCTTAA
 
Protein sequence
MHGKAIKFTS VFITLLICLM IIGTVSAKTY DSENASTLED WQSVEKAMGE KGNVSPDGAI 
TFAIPMTLNV TLDGIKLNPA SERYHEFDFM RAGDKAMMVG EIGVTEEEVK NVSDMVLQSG
LQVTAIHNHL LRTSPHIIWI HIYGYGDPAD MAKKIRNITD YVNRGSSASE SEKFQSKGIN
TTELDRIIGD KGSAEGGDYN YEIPRADKIQ MNGYTLSPVM DVSTPISFQP LGKGNAAVIG
EFALEENEVE PVVRTLTANG IEVTALHSHM ITEQPRLFYV HCWATGDAAE LAGIMREALN
ETNIKIGSES S