| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1984 |
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| Symbol | |
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| ID | 3627959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 2478141 |
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| End bp | 2478686 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637700862 |
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| Product | haloacid dehalogenase-like hydrolase |
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| Protein accession | YP_305498 |
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| Protein GI | 73669483 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.911586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAATCG AGCCCGAAAA GCTTTGGGAT ACGTACATGT TTAAGGTCAG GCAGGAAATG
GAGAATTCCA GGGAAGTGTA TCCAGAGATC AAGGTAGAGG AAATCTTTGC AGAGATTTGC
AGGGAAAATT CGATCTGGAA TATTGACGAA AACAGCCTGG GAGTAGAAGC CTCAAGGGTC
TTTCGGGCAG CTTCTATGCG GAAACTCCGG GCTTTTCCCC AGAGCATCAA ACTGATTGAA
CATTGCATAA ATATTCCCAA GTGTGTAATC TCCAATGGGC AAAGAGTTTT TTCCGAACTG
GAACTTAGGT TTCTTGGGCT CCACGACTAT TTTGACTTTG TTATCTTCTC GTCGGATGTA
GGATACAAAA AACCTGACCT CAGACTTTTT ATGACTGCGC TCAAAAGGAT GGGCCTTGAA
CTCGAACCCA AATGTGTCGT GTCAATAGGA GACTCTAACG AAAACGAGCT AGCGCCTGCA
AAAAAACTGG GAATGCGCAC CATGAATATT AAAGAAGCCT GGGAGCTATT CGGATTGAAA
GATTGA
|
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| Protein sequence | MKIEPEKLWD TYMFKVRQEM ENSREVYPEI KVEEIFAEIC RENSIWNIDE NSLGVEASRV
FRAASMRKLR AFPQSIKLIE HCINIPKCVI SNGQRVFSEL ELRFLGLHDY FDFVIFSSDV
GYKKPDLRLF MTALKRMGLE LEPKCVVSIG DSNENELAPA KKLGMRTMNI KEAWELFGLK
D
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