Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1979 |
Symbol | |
ID | 3627954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 2472499 |
End bp | 2474049 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637700857 |
Product | oligopeptide ABC transporter, solute-binding protein |
Protein accession | YP_305493 |
Protein GI | 73669478 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | [TIGR02294] nickel ABC transporter, periplasmic nickel-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAA AAGAGGGAAT TCTTTTTATT TTGCTGGCTC TCGTTGTCTT GGGAGCAGGT TGTACGGACA AAGAACAAAA AGGAGATAAT CAAACATTGT CCATCTCGGG TCAATGGAGT CCCACCTCTA TTGATCCTCA CATATCGGGG ACTGTTCCTC AAAGGCTCGG GTACGTAGAA ACTCTTGTAG GAGTTGATTA TGAAGGAAAG ATTATCTCAA ATCTTGCAAA ATCATGGGAA GTCTCCAGTG ATGGAAAAAA ATGGACATTC AAATTGAGAG AGGGCGTTTT ATTCCATGAT GGGACACCTT TCACAGCCGA AATAATGAAA AAATCTCTTG AAAGGTCCTT TATCCAGTCG GCATCAACAT TCGGAAAAAT TCCTGTAACG TCGATTGAGG TTCCTGATAA CCTAACATTA GTAATCAACC TCAATTCAAC TTTCCCTGCA CTTCCTGCTT ATCTTTCCAA AGGAGAAAGT GCTGCTCTTG CCCCAGGATC TTATGATGCA AGCGGAAACG TCACAAAGCC TATCGGCACA GGGCCTTTTA TCTTTGAATC CTGGAAACCG AACGAAGAAA TTGTTATCGT CAAGAATCCC GATTACTGGG GACATGTTGC TTCAGTTGAT AAAGTGGTAT ACCGGGTAAT TCCTGAAGTA CTTACAAGAA AGATGCTCCT TGACAGTAAG GATATTCAAA TAGCAATGAT TCTTTCGCCT GATGTTGCCG ATAAATATAA CGAAAAGGCT GATTATACAG TCCTTGAAGA GCCGATCGCT CGTGTAAGGA TGATAGCGTT CAATACGGAA AAGGAGCCCT TCAGCGATAA AAAGGTACGT CAGGCTGTTA ATTACGCTAT AGATCGGGAA GCAATAGTGA ATTCTGTTCT TTACGGATAC GGAACCACAG CATCAGGACT TTTTCCTCCT CAGTTTTACT GGGCAAACAA GGATATTGCC CCTTATACTT ACGACGTGGA GATAGCAAAA ACACTCCTTG ATGAAGCAGG ATGGACCGAC TCGGATGGTG ATGGGATCCG TGATAAAAAC GGCAAGCCTA TGAAGATTAC ATTAGTTACT TATTCTGAAA GAGCAGAACT GCCGTCGATC GCTGAGGTGA TCCAGCAGCA GCTTAAGAAA GTAGGCATAG AGACAGAACT TAAGGTCCTC AATACCGATG CCGCAAATAC CCAGAGGAAT AAAGGAGATT TTGATATTTA CCTCGCAGGA AGGGGACTAT TTTTCGTACC TGATCCTGAT GAGATAATGA TGACAGACTA TCATTCAAGT GGCACATCAA TCGACGGTTG GGGAGCATAT CGCTGGCACA ACGACACTGT AGATCAGCTG ATTGAGCAGG CCCGAACCAC TTCCGATGAA GCTGCCAGAA AAAAACTCTA TGATGAAGTT CAATCAATTG TTGTCGAAGA AGCGCCGGTT GCGTATCTTA ACTACTACGT TAATATCGAC GTCACAACTT CGAACATAAA AGGATATCGT CTCCATCCTA CAGAGTGCTC TTTCGACCTT CAGAACGTCT CAATTTCCTG A
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Protein sequence | MKRKEGILFI LLALVVLGAG CTDKEQKGDN QTLSISGQWS PTSIDPHISG TVPQRLGYVE TLVGVDYEGK IISNLAKSWE VSSDGKKWTF KLREGVLFHD GTPFTAEIMK KSLERSFIQS ASTFGKIPVT SIEVPDNLTL VINLNSTFPA LPAYLSKGES AALAPGSYDA SGNVTKPIGT GPFIFESWKP NEEIVIVKNP DYWGHVASVD KVVYRVIPEV LTRKMLLDSK DIQIAMILSP DVADKYNEKA DYTVLEEPIA RVRMIAFNTE KEPFSDKKVR QAVNYAIDRE AIVNSVLYGY GTTASGLFPP QFYWANKDIA PYTYDVEIAK TLLDEAGWTD SDGDGIRDKN GKPMKITLVT YSERAELPSI AEVIQQQLKK VGIETELKVL NTDAANTQRN KGDFDIYLAG RGLFFVPDPD EIMMTDYHSS GTSIDGWGAY RWHNDTVDQL IEQARTTSDE AARKKLYDEV QSIVVEEAPV AYLNYYVNID VTTSNIKGYR LHPTECSFDL QNVSIS
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