Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1808 |
Symbol | pgk |
ID | 3625266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 2259572 |
End bp | 2260810 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637700690 |
Product | phosphoglycerate kinase |
Protein accession | YP_305329 |
Protein GI | 73669314 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTTCTA GAGACTTTCT TACAATCGAT GATTTTGACA CGCACGGAAA GACAATTCTT GTAAGGGTTG ACCTGAACTC CCCTATGGAT CCACAGGGTA ATATTCTGGA TGATATGCGG ATCCGAAGCC ATATTGCCAC CTTGAAGGAT CTTGAGGACG CAAAAGTTGT TTTGCTTGCA CACCAGAGCA GGCCCGGAAA AAAAGACTTT ACTACAATGA AGCCTCATGC CAACCTGATG TCCAAATACC TGGGAAAGCA GGTTCTTTAT GTAGATGATA TTTTTGGAAC TTATGCAAAG ACCAGGATTG CTTCTATGGA AAATGGAGAT GTCATCCTGC TCGAAAATGT AAGGTTCTAT TCTGAAGAAA GCCTCGAAAG AACTCCAGCA GAACAGGCAA AAACTTATCC GGTTAAAAAA CTGGCACCTT TTGTAGATAT CTTCCTTAAT GATGCCTTTG CCGTATCTCA CAGGTCTCAA CTTTCCGTAG TAGGATTTAC AGAGGTTCTC CCTACCGGAG CCGGAAGGGT CATGGAAAAG GAACTCACGT CTTTGGATCG GGGGATCAAA GGAGGGGAAC GGCCAACGAT TTTCGTTCTC GGAGGGGCAA AAGTCGATGA TTCGCTCCAT GTGGCGGAAA ATGTGCTTTC AAATGGAGGA GCTGACCGGG TACTCCTGAC CGGAGTAGTA GCAAATGTGG CACTTGCGGC ATCCGGTATA GATATCGGAA AAGTAAATCT GGACTTCATC AAATCCCAGG GCTACGAAGA CCAGATCGAA AAAGCAAAAA GTATACTTAC GAAATTCAAA GATAAAGTTG GTCTTCCAAG GGATGTGGCT TTAAACGACA ATAAGAAGCG GGTCGAATTG CCTGTTTCAG AACTTAATTC TAATTCTCTT CCTATAAACG ATATTGGGCT TGAAACCATT GTGGACTTTA CCAGTGAAAT CGCAAGTGCA AAAACTGTTA TCTTAAACGG CCCTGCGGGG ATTTCCGAAG TTGCTGAGTT TGCCCTTGGA ACGCACGAGA TTATAAAAGC TGCTATTAAA TCCGAGTTTT CAATCATTGG CGGTGGGCAT ATTTCGGCAG AAGTTGAGCA TCTCGGGCTT GCACACCGTT TCTCTCACAT CAGTACAGGT GGCGGGGCAC TAATTGATTA TCTCTCAGGA GTAAAGCTGC CTGGTGTAGA GGCCCTGAAA TCTGCAGCTA AGAGATATGA AGAAGCTAAG AAAATCTAA
|
Protein sequence | MTSRDFLTID DFDTHGKTIL VRVDLNSPMD PQGNILDDMR IRSHIATLKD LEDAKVVLLA HQSRPGKKDF TTMKPHANLM SKYLGKQVLY VDDIFGTYAK TRIASMENGD VILLENVRFY SEESLERTPA EQAKTYPVKK LAPFVDIFLN DAFAVSHRSQ LSVVGFTEVL PTGAGRVMEK ELTSLDRGIK GGERPTIFVL GGAKVDDSLH VAENVLSNGG ADRVLLTGVV ANVALAASGI DIGKVNLDFI KSQGYEDQIE KAKSILTKFK DKVGLPRDVA LNDNKKRVEL PVSELNSNSL PINDIGLETI VDFTSEIASA KTVILNGPAG ISEVAEFALG THEIIKAAIK SEFSIIGGGH ISAEVEHLGL AHRFSHISTG GGALIDYLSG VKLPGVEALK SAAKRYEEAK KI
|
| |