| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1790 |
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| Symbol | |
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| ID | 3625152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 2205445 |
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| End bp | 2207319 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637700672 |
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| Product | alpha-amylase |
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| Protein accession | YP_305311 |
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| Protein GI | 73669296 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.890851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCAAATG AACTTGAACT TCTGCCGCTC CATAAGCTTG GGGCCTGGGA AGATGAACAG
ACTTCCGGAA AAATAAATTT CGGGCTTTTT TTACCAGGTA TTTCGGAAGA GGGAGAATAT
GAACTCTTTG TGAGGGTTAT TCATGAAAAG GACCAGTTCC TTCAGGATAT CCTTCCAATG
GACTTTGAAA TGGAACATTC AGTGGACCCA GATTACGGGG ATTACTGGTC TGCAACGATA
AATATTGAGG CTAAAGATAA GCTAAAACCA TTTTCTGCAT GGGGAATTCC TGGAAAATAT
GTTTACCGAT ACTGCCTTAA AAATCCAAAA AATCCAGAGC TTATTGACTG GATTATCGAT
CCTTTTGCCA GGGAATTCGG GGTTGGAAAA TTATCTGCTT TCACCCTCGG GTACGAACAA
TATACGTGGG ACAAAAATGA ACTGGAATGG AAAACCCCTT TCATAAATGA TATTGTCCTC
TATGAACTCA TGGTCAACGA GTTTGCGGAT GATATCAAAG GGACAATTGA CCATCTGGAT
TACCTCGCAG ACCTTGGAAT TAATTGTATA GAACTGATGC CTCTTTCAAA CATTGAGAAA
AGAGTGGACT GGGGATTTGC ACCGATCGGG TATTTCGGGG TGGATGAGCG TTTCGGAAAT
CGAAAAGATA TGCAAGAATT GATCGATAAA GCTCACCAGA AAGATATCGC GGTCATAGTA
GATTCGGTTT ATGCACATAC AAGCCATCTC TTTCCATACT ACTATGTTTA CAACGAACTT
GGATATCCTC TGGATAAAAA TCCCTTCATG GGCCCTTTCG CTGAAAATGC TTTTGGAATA
AGTACAGATT TCACTTACAA ATTTACCCGC AACTTCTTTT TGACAGTCAA CAATCACTGG
CTTGACAGTT ATCATATAGA CGGTTTTAGA TACGACTACG TACCCGGGTA CTGGCTGGAG
GATTCGGAAA ATGGCTACAC CAAACTTGTA CGGGATACAT ACCAGTTGGT TAAAGCAAAA
AAAGGCTCTT CCGATCACTG GCAGCGATTT TTTGAAGGAG AGTCTGTAAA CCTAATCCAG
TGTGCTGAGC AGCTTCAAAA ACCCGTAGAA ATTCTGAATA AAACCTATAG TAACTGTACC
TGGCAAAATA GAACACTGAA TACGGCCAGA GGGATATATG GAAATTGTGA AAAATTGACC
GAGCTTGGTT CCCTCTTCGG GCTCTCAGGT TATCAGACAG GAGTTCAGAA CAATGGAGAT
AAGATTACAA AAACTGCTCT ACAATATCTG GAAAACCATG ATCATTCCCG GTTTATCTGT
AACTTTGGAA CAGTTGCCCG TGATAATGAA CTTTTGAAGG AAGGCGATCG TGCCTTCTGG
TATAAGGTAC AACCTTATCT GATAGGCATG TTTACAGCAA AGGGCATTCC AATGTTATGG
CAGGGGCAGG AGTTTGGGGA AAACTACTGG CTTCCTCAAG AAGGATGGGG AAGAGTGCTT
TTGTACAGAC CTGTGCGCTG GGAATACTTT TATACTTCTG AAGGTCGGTC GCTGGTTCAA
CTCGTCAGGA AACTGGTTAA GCTTCGCAAG AATAACCCTC AGTTTACCAG AGGAGAGCAT
TACTTCTACA ATGATTATAC CTTGTATCAG TCTCGAAATA TCATGATGTT TTCCCGGACT
TGCAAAGAAG TTTTCAGCCT GGTTGCATTG AACTTCGGAG CCCAGGATCA GGTAGTTTAT
TTCAAGTTTC CATCTGATGG TAATTACCAA GAAGAACTTC ATGGTCAGGA TAATTTAAAG
GGAATTTCTG CGGGAAAGAA CATCCAGCTT AACATTCCCA GCAACTATGG AAAAATCTGG
ACATTGGCAG TTTGA
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| Protein sequence | MPNELELLPL HKLGAWEDEQ TSGKINFGLF LPGISEEGEY ELFVRVIHEK DQFLQDILPM
DFEMEHSVDP DYGDYWSATI NIEAKDKLKP FSAWGIPGKY VYRYCLKNPK NPELIDWIID
PFAREFGVGK LSAFTLGYEQ YTWDKNELEW KTPFINDIVL YELMVNEFAD DIKGTIDHLD
YLADLGINCI ELMPLSNIEK RVDWGFAPIG YFGVDERFGN RKDMQELIDK AHQKDIAVIV
DSVYAHTSHL FPYYYVYNEL GYPLDKNPFM GPFAENAFGI STDFTYKFTR NFFLTVNNHW
LDSYHIDGFR YDYVPGYWLE DSENGYTKLV RDTYQLVKAK KGSSDHWQRF FEGESVNLIQ
CAEQLQKPVE ILNKTYSNCT WQNRTLNTAR GIYGNCEKLT ELGSLFGLSG YQTGVQNNGD
KITKTALQYL ENHDHSRFIC NFGTVARDNE LLKEGDRAFW YKVQPYLIGM FTAKGIPMLW
QGQEFGENYW LPQEGWGRVL LYRPVRWEYF YTSEGRSLVQ LVRKLVKLRK NNPQFTRGEH
YFYNDYTLYQ SRNIMMFSRT CKEVFSLVAL NFGAQDQVVY FKFPSDGNYQ EELHGQDNLK
GISAGKNIQL NIPSNYGKIW TLAV
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