Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1394 |
Symbol | tfb |
ID | 3626421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 1717375 |
End bp | 1718388 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637700284 |
Product | transcription initiation factor IIB |
Protein accession | YP_304934 |
Protein GI | 73668919 |
COG category | [K] Transcription |
COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGAAG TCGAAAGAGT TCGCTATTCT GACACTCTTG AAAGAGAAAA AATACGTGCC ATGATCAAAG CTCGCAAAGA GAAACAAAAG GAGCAAAGTT TTGAGAAAGA AAAGGCCGTG TGTCCAGAAT GCGGCAGCAG AAACCTCGTC CACGACTATG AGCGAGCCGA ACTCGTGTGT GGGGACTGCG GACTTGTCAT TGATGCCGAT TTTGTGGATG AAGGCCCAGA ATGGCGAGCT TTCGATCATG ATCAACGTAT GAAGCGTTCC CGTGTGGGTG CGCCCATGAC ATACACAATC CACGACAAAG GGCTTTCCAC AATGATTGAC TGGAGGAACC GCGACTCCTA TGGAAAGTCA ATATCTTCCA AAAATCGTGC TCAGCTTTAT CGTTTAAGAA AATGGCAGCG TAGAATCCGT GTAAGTAACG CAACTGAAAG AAACCTTGCA TTTGCACTAT CTGAACTGGA CAGAATGGCT TCGGCTCTCG GTCTTCCGAG AACTGTGCGG GAAACCGCAG CTGTCGTCTA CAGAAAAGCT GTGGACAAGA ACCTTATCCG TGGAAGAAGC ATTGAAGGTG TTGCCGCAGC CGCTCTTTAT GCTGCTTGCC GCCAGTGTAG CGTCCCAAGA ACTCTTGATG AAATCGAAGA GGTATCCAGG GTCAGCCGGA AAGAAATCGG AAGAACTTAC CGTTTTATTT CCAGAGAACT CGCACTAAAG CTCATGCCCA CGTCTCCTAT AGACTATGTC CCAAGGTTCT GTTCAGGCCT TAATCTTAAA GGAGAAGTCC AGTCAAAGAG CGTTGAGATC CTGAGGCAGG CTTCCGAAAA GGAACTCACA AGCGGGAGAG GTCCCACAGG AGTTGCTGCC GCTGCAATTT ATATTGCTTC CATTCTCTGC GGTGAACGGA GAACTCAGCG GGAAGTTGCA GATGTAGCCG GGGTTACGGA AGTCACTATC CGAAACAGAT ACAAAGAGCT TGCAGAAGAG CTGGATATAG AGATTATTCT CTAA
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Protein sequence | MVEVERVRYS DTLEREKIRA MIKARKEKQK EQSFEKEKAV CPECGSRNLV HDYERAELVC GDCGLVIDAD FVDEGPEWRA FDHDQRMKRS RVGAPMTYTI HDKGLSTMID WRNRDSYGKS ISSKNRAQLY RLRKWQRRIR VSNATERNLA FALSELDRMA SALGLPRTVR ETAAVVYRKA VDKNLIRGRS IEGVAAAALY AACRQCSVPR TLDEIEEVSR VSRKEIGRTY RFISRELALK LMPTSPIDYV PRFCSGLNLK GEVQSKSVEI LRQASEKELT SGRGPTGVAA AAIYIASILC GERRTQREVA DVAGVTEVTI RNRYKELAEE LDIEIIL
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