| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1293 |
|---|
| Symbol | |
|---|
| ID | 3627702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 1601704 |
|---|
| End bp | 1602459 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637700183 |
|---|
| Product | outer membrane protein |
|---|
| Protein accession | YP_304836 |
|---|
| Protein GI | 73668821 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2968] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.269819 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACAGG AAAATAAAAA CAATAAGCTT TATTACGTTA TCATTGCGCT ATCAGTTGTT
CTGGTGCTGA TGTCAGCAAC GATATACGCC ATTTCACAGA GTGGGTCTGA AAAGGATACG
GAAAATACTA TTTCCATTAG TGGATATGCT GAACAGAAAG TTATCCCTGA CACGGCAACA
TTGAACATCG GTGTTGTAGT TCAATCTGAA ACTGCAAAAG AAGCGACAGA TAAAAACGCA
GCCCTTATGA GCTCTGTAAT AGCAGAACTT AAAGCGATAG GATTGCAGGA CAAGGAAATA
CAGACAGCCT ATGTTTCCGT ATCCCCGGTA TACAACTATG ATGCGAATGA TACGCAAACA
ATCAAAGGTT ACTCTGCATC CAACAGTGTG CAGGTCACAA CTAAAAATCT CGACAACCTG
AGTGATATCA TTGACAGGTC CACAGCCGCA GGAGCTAATG AGATTGGAAG CATTTCATTC
TCGGTATCCG ATGACAAGCA AAAACAGCTT CGTGAAGACT TGATGAATGA AGCAGTATCA
GATGCATCTT CTAAAGCCAC TACGCTTGCT AAGAGCCTGG GGACTAAGAT AACCGGTGTG
CAGACTTCAT CTGTAAGTGA AAACAGTGGT TCCAGAGCAA TTTACGAATA TGATATGGCA
ACAACAGCAA AGGGAGCAGG AGCAGGGTCC ACTCCAATTC AGCCAGGCGA GTCTACCGTC
TCAATGTCAG TACAGGTTAC GTACTACATT AAATAA
|
|---|
| Protein sequence | MSQENKNNKL YYVIIALSVV LVLMSATIYA ISQSGSEKDT ENTISISGYA EQKVIPDTAT
LNIGVVVQSE TAKEATDKNA ALMSSVIAEL KAIGLQDKEI QTAYVSVSPV YNYDANDTQT
IKGYSASNSV QVTTKNLDNL SDIIDRSTAA GANEIGSISF SVSDDKQKQL REDLMNEAVS
DASSKATTLA KSLGTKITGV QTSSVSENSG SRAIYEYDMA TTAKGAGAGS TPIQPGESTV
SMSVQVTYYI K
|
|---|
| |