Gene Mbar_A1273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1273 
Symbol 
ID3627760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1580945 
End bp1581256 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content46% 
IMG OID637700163 
Productsignal recognition particle protein Srp19 
Protein accessionYP_304816 
Protein GI73668801 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1400] Signal recognition particle 19 kDa protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.831098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATGA GAGATAGGGG AAAACTTGTA ATCTGGCCGG TATATCTCGA CCAGACAAAG 
TCAAGGAGCA GCGGCAGAAT AATTTCCCGG AAAAATGCTA TAAAGGAACC GCAGCTTAAT
GAGATAAAAG AAGCAGCCCG ACAACTTGGC CTGAATCCCG AAGTAGAGCC TCATAAAGCA
TATCCCAAGT CCTGGTGGGA AGTAAGCGGG AGAGTGCTCG TGGATGATAA TGGTCCGAAA
ACCGTTATTG CAAAACAGAT AGCTTTAGCC ATAAAGAAGA TGCGCGGGCC GGAGAGCTCT
GCTAAAGCTT AA
 
Protein sequence
MMMRDRGKLV IWPVYLDQTK SRSSGRIISR KNAIKEPQLN EIKEAARQLG LNPEVEPHKA 
YPKSWWEVSG RVLVDDNGPK TVIAKQIALA IKKMRGPESS AKA