| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1271 |
|---|
| Symbol | |
|---|
| ID | 3627758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 1579730 |
|---|
| End bp | 1580392 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637700161 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_304814 |
|---|
| Protein GI | 73668799 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.384497 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGAG TAAAGATTGG AAATGTTACA ATTCAGTGGT TGGGTCACTC TGGCTTTTTA
CTTGAAGGGG ATGAAAAGAA AATTTATATT GACCCCTACG ACCTCAGCGA AGAGCCAGCT
TTTGAAGATA AAGCTGATAT CCTGTTGATT ACTCATGAGC ACTTTGACCA CTGCAGCCCT
GATGATATCC GAAAGGTTCG GCGGTCGGAC TCAACCACTC TGATACCTGA AAGTTTATCC
CTGCAATTCA AAGGGGACGC AAGGCGGGTT GCTGAGGGAG ATGTGCTGGC CGACGGGCTT
GAAATAAAGG GAACCAGAAT TGAAGTAGTT CCGGCTTATA ACCTCGATAA ACCCTATCAT
CCCCATGGAT TGGGAGTGGG GTATATAGTA GAACTTGGAG GAATCCGGAT CTATCATGCC
GGAGACTGCG ATTTTATTCC TGAAATGAAA AATATCAGGG TCGATGTCGC CCTTTTGCCT
ATAGGGGGTA CGTATACAAT GGATGAAGAG GAAGCAGCAA GTGCAGCCGC AGCAATTTCC
CCAAAAGATG TAATTCCGAT GCACTACGGA AAGCCAGACA TAACAGGTGG AGATCCCGAA
AAGTTTAAAG CTCTTGTACA CGGCAAAAAC CCAGATATTA ATGTGATTAT TCTTGATTCC
TGA
|
|---|
| Protein sequence | MNRVKIGNVT IQWLGHSGFL LEGDEKKIYI DPYDLSEEPA FEDKADILLI THEHFDHCSP
DDIRKVRRSD STTLIPESLS LQFKGDARRV AEGDVLADGL EIKGTRIEVV PAYNLDKPYH
PHGLGVGYIV ELGGIRIYHA GDCDFIPEMK NIRVDVALLP IGGTYTMDEE EAASAAAAIS
PKDVIPMHYG KPDITGGDPE KFKALVHGKN PDINVIILDS
|
|---|
| |