| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1005 |
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| Symbol | |
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| ID | 3626888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 1227072 |
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| End bp | 1229096 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637699894 |
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| Product | DNA polymerase II small subunit |
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| Protein accession | YP_304553 |
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| Protein GI | 73668538 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1311] Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGAA AGGATATTAT AAGGGCTGTT ATGGAAAAAG AGTACCAGAT CAGCCCTGAA
GCCGTGGAAC TTATTTATTC CAGTAACTCT CCCGAGGACC TGCTTAAATA TATCCTTTCA
ACTGTAAATG ACTCTGTTAT TGTTATAGGT GTCGAAGATA TAGATATTGA AGGCTTTGCC
GCTTTTTCAG CAGGGGAGTC GCCTTCAGAT AAGATAAATG CTCTCGTTCC AGAAGAAAGG
AAAATCCTTT CTGGGGTTTC CATACTCTCT TCTAGATCAG GCAATCCATC TTCAGAATCT
GATTCCTTTT TAGTGCCTGA TCCTCTTTCA GAACCTGTTC TTTCCTCAGA GCCTGATGTT
ATTACTGCAG CTCCTGACCC AAGTATAAAA CCATCTCAAG ACTCTGTTCC TGATTCTTCA
GTTCAGGATA TGGTTCTGGA CAAGGCTTAT GAATCAGCCC CGGATACTCC AGATGCTTCA
AATACTCCAG ATACTCCGAA TATTCCGGAT ACTCTGGATG TACAATCAGG CAATGTTTTA
TCTGACGAAG ATTCGGCCTC CAATCTTGCC TCAGACTCCC TTTCTTCGGC GAAGGCAGCT
TCTCCAACTT TCTCTTCTCA TTCCTCCCTG GCTGTAAACA GGTCAGCCTC TTCTTTTTTC
GGGCAGGGGA ACTCTCTTTC TTCATTCCCT TCAAATAGGA GTTTCAGGAC AGAACCATCT
TCCTCCGCTT CTGAGAGAGG GATATTTTCG GGTTCCAGGG ATGAGTATAA ACATTACCCG
GGTAGAAACC CTGTGACTGT AGTTTCGGAT ATAACAGGGC ATTCCACCTG TGTTGGGGAA
TATATGCAAT TTGTGCAGTA TTTCAGGGAC AGATACAGCA GGCTTTCAGA GATTATCCGG
GGAAGGATCA ACGCACGCCC CATCGAAAGT TTAAAAAGAA GAAGCTTCCG CAGAGGAGGA
GACGGAGGCT CTGAAGAAAT CTCGATTATA GGCATGGTTT CGGATATCAG CAGCACAACG
AACGGCCACA AAATCCTTTC TCTGGAGGAC CCAACAGGTT CTTTTTCAGT CCTCATTCGG
AACTCTGATA AAGAACTTTT TGAACTTGCG TCAAAAATTA TCCTGGATGA GGTCATAGGG
GTAACTGGCT CGATAACCAA CGACGGAAGC CTCATGCTGG CAACAAAGCT AATACAACCC
GATGTCCCGA ATAATGTCCA GCGCAGAACC GGAAGCCATG GGAAAGCTGT ATTGATTTCG
GATGTGCACG TGGGCAGCTC CCAGTTTATG GAAGATTCCT GGCTGGATTT CTTGGATTTT
TTGAAAGGGG AATCGGATTC GGAGGATATG CGGGAACTTG CAGCCAGTGT TCGTTATCTT
GTTGTCGCAG GAGACATTGT TGACGGGATA GGGATCTATC CTGATCAGGA AATGGAACTT
GACATTCTGG ATGTCTACGA ACAGTACAGG AAGGCTGCCG AATATTTCAG GGAAATTCCC
GAGCATATTC GTGTAATCAT AAGTCCAGGC AACCACGATG CTGTTCGCCA GGCAGAACCC
CAGCCTGCCC TGCCGGAAAG TATTCAGGCG TATTTCCCTG AGAATTTTGT TTTTGTTGGT
AACCCTGCTT TTCTGGAACT TGACGGTGTC CGCCTTCTTA TCTACCACGG CAGGTCGATT
GACGATCTTG TGGCGACTGT TCCCGGAGTC TCGTATCAGG AACCTGCAGG AGCAGTCCTT
GAGATGCTGA AATGCAGGCA TCTTGCTCCA ACCTATGGGA GTAGAGTTTC CATATCCCCT
GAGAAAAAGG ATTATTTCAT AATTGATCCT GTGCCTGATA TTATTCATAC AGGTCACGTC
CATACCCTGG GAGTCCAGCG CTATAAGAAT GTCCTTCTGG TCAATTCCGG AACATGGCAG
GGTCAAACAG AGTTTCAGAA GCGTGTGAAT CTAGTACCTG TCCCTGCTAG GGTACCAATT
GTGGATCTTG AAGATTTTGA TGTAAAGATT CTTGCTTTTG ACTGA
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| Protein sequence | MERKDIIRAV MEKEYQISPE AVELIYSSNS PEDLLKYILS TVNDSVIVIG VEDIDIEGFA
AFSAGESPSD KINALVPEER KILSGVSILS SRSGNPSSES DSFLVPDPLS EPVLSSEPDV
ITAAPDPSIK PSQDSVPDSS VQDMVLDKAY ESAPDTPDAS NTPDTPNIPD TLDVQSGNVL
SDEDSASNLA SDSLSSAKAA SPTFSSHSSL AVNRSASSFF GQGNSLSSFP SNRSFRTEPS
SSASERGIFS GSRDEYKHYP GRNPVTVVSD ITGHSTCVGE YMQFVQYFRD RYSRLSEIIR
GRINARPIES LKRRSFRRGG DGGSEEISII GMVSDISSTT NGHKILSLED PTGSFSVLIR
NSDKELFELA SKIILDEVIG VTGSITNDGS LMLATKLIQP DVPNNVQRRT GSHGKAVLIS
DVHVGSSQFM EDSWLDFLDF LKGESDSEDM RELAASVRYL VVAGDIVDGI GIYPDQEMEL
DILDVYEQYR KAAEYFREIP EHIRVIISPG NHDAVRQAEP QPALPESIQA YFPENFVFVG
NPAFLELDGV RLLIYHGRSI DDLVATVPGV SYQEPAGAVL EMLKCRHLAP TYGSRVSISP
EKKDYFIIDP VPDIIHTGHV HTLGVQRYKN VLLVNSGTWQ GQTEFQKRVN LVPVPARVPI
VDLEDFDVKI LAFD
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