Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0992 |
Symbol | |
ID | 3626875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 1212434 |
End bp | 1212901 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637699882 |
Product | iron dependent repressor |
Protein accession | YP_304541 |
Protein GI | 73668526 |
COG category | [K] Transcription |
COG ID | [COG1321] Mn-dependent transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0545444 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAGC AAAGTTATCC TGAATTTACA GGCCTTGAAC TCTCTCCGAG AAAGGTAGAT TATCTCAAGT TCATTCTTGA AAAAGGAGGT ACTGTAAAAA CTACAGAGAT CTCTTCGGGC CTGCAGGTAG ATCCTTCAAC CACAACCAAG ACCTTAAATG AGCTTGCAAG TGCAGGCTAC CTGAATCATG TTCCTTATAG GGGTGTGAAT TTGACGGAAC TGGGTATGGC ATATACACAA TTTCTTATTC GAAGGCACAG GATCCTCAGT CTTCTTCTAA CCCATTACGG CCTTTCTTCG GAGGAAGCAT GTAGTGAAGT TTCGCGTTTT GAGGCTTTCG TCTCAAGGGA TGCTATAAAT AAAATCTGCA GCTCAATGGG TCATCCAATG TTTGGAGTAT GCGGAGAAAT TAGCCATGAA AATGCCTGTA TGAAAGAAAT ATCTATTGAA CACCTGACAA AATGCTAA
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Protein sequence | MNEQSYPEFT GLELSPRKVD YLKFILEKGG TVKTTEISSG LQVDPSTTTK TLNELASAGY LNHVPYRGVN LTELGMAYTQ FLIRRHRILS LLLTHYGLSS EEACSEVSRF EAFVSRDAIN KICSSMGHPM FGVCGEISHE NACMKEISIE HLTKC
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