Gene Mbar_A0992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0992 
Symbol 
ID3626875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1212434 
End bp1212901 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content41% 
IMG OID637699882 
Productiron dependent repressor 
Protein accessionYP_304541 
Protein GI73668526 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0545444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAGC AAAGTTATCC TGAATTTACA GGCCTTGAAC TCTCTCCGAG AAAGGTAGAT 
TATCTCAAGT TCATTCTTGA AAAAGGAGGT ACTGTAAAAA CTACAGAGAT CTCTTCGGGC
CTGCAGGTAG ATCCTTCAAC CACAACCAAG ACCTTAAATG AGCTTGCAAG TGCAGGCTAC
CTGAATCATG TTCCTTATAG GGGTGTGAAT TTGACGGAAC TGGGTATGGC ATATACACAA
TTTCTTATTC GAAGGCACAG GATCCTCAGT CTTCTTCTAA CCCATTACGG CCTTTCTTCG
GAGGAAGCAT GTAGTGAAGT TTCGCGTTTT GAGGCTTTCG TCTCAAGGGA TGCTATAAAT
AAAATCTGCA GCTCAATGGG TCATCCAATG TTTGGAGTAT GCGGAGAAAT TAGCCATGAA
AATGCCTGTA TGAAAGAAAT ATCTATTGAA CACCTGACAA AATGCTAA
 
Protein sequence
MNEQSYPEFT GLELSPRKVD YLKFILEKGG TVKTTEISSG LQVDPSTTTK TLNELASAGY 
LNHVPYRGVN LTELGMAYTQ FLIRRHRILS LLLTHYGLSS EEACSEVSRF EAFVSRDAIN
KICSSMGHPM FGVCGEISHE NACMKEISIE HLTKC