Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0947 |
Symbol | |
ID | 3625545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 1150971 |
End bp | 1154126 |
Gene Length | 3156 bp |
Protein Length | 1051 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637699840 |
Product | hypothetical protein |
Protein accession | YP_304499 |
Protein GI | 73668484 |
COG category | [R] General function prediction only |
COG ID | [COG1204] Superfamily II helicase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0339095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCGT GGGTAATGAA TTTAATAGAT GATGACTCTT TAAAACAAGC CCATATAGAG TCTTCCAGAC GATTACTTCA CGAATCACTA AAATTGGATT ATTCATCAGT CGAAGAAGAG AACTCAAACT TTTTATTGAT AATTGATTCT TTAGAATTGG CTTTGATTGA TTTATTAGAC GATGATGAGC AAATCAATAG TCTTCGTAAA ATCAGTGCAG AGCTATTTCA ATTATTAAGA GTACTTCCCA AGCCAGAGGA TCCTATTGAA GCTGGAAAAG AATATTTGCG CTTATCTTGT TTTGGCGTTT TAGGAGATCG TGGAGCAGAT GCATCAAGGT TGCTTAGAGA GCTGCCTCCA ATAGATCTAC CAATTAATTC ACCATATTGG AATAAAAGAA CATTTGCTAC TATTATTGAT GTGTGGTTGT CTATTATTAG AAAAGATGGA TGGAATGACT TAGATAGAGT TCACGAGAGA GTTGTAGATT TAAGAAAACA TCAAAATGAA TATGAAAAAG ATTATCTTGA ATCAGAAGGT GATTATTCAA GAACTGCTGC TTGGGAATTG GTAGCATTAT ATCATTTAGC AAAAGCTGCG GAATTGTTAG CGATTTATAC AACTCAAGGT CAAGTAGAAG GAAACTACGA TATAAGACAA CAACTAGAAT CACAATTTGA TTCTGCACTA AACGCATGTA CTAGAGCAGA ACTAGTTGAA CTAGATAATT TAACTCGATT ATTAGAGTGT ACATCTCAAC AGCTAGTTGA TAATTGTATA TGGACTATAA CAAGAGCTGT TAATGATCAA GTAACTCAAT TTGTTGAAAC CCTTGTATCA AGAGAACGAA GTAAACCAAT TTTTGAAATG TTGCCGCCTC AAAGGTATAC TTTACGAGAA GAAGGATTAC GCAGTTCAAG TCCACGTTCG ATTGTAATTA ATTTGCCTAC ATCTAGTGGA AAAACGTTTA TTGCTGAATT CCGAATCCTG CAAGCACTTA ATCAATTTGA AAATGGATGG ATAGCATATC TCGCCCCTAC TCATGCACTC GTAAATCAAA TTTGTACACG TCTAAGAAAA GATTTTAATC CCCTAAAAAT TAACGTGGAG AAAATCAGCC CTGCTCTTGA AATCGATAGT CTTGAAGCTG GTCTGCTTAC TGATGTGGAA AAATCTTCTT ATTTCCGAGT GCTGGTTACT ACACCTGAAA AATTGGATTT AATGCTTCGT GGAGGATGGG AACAAAAAAT AAATCGGCCT TTATCTTTAG TAATTGTCGA CGAAGCACAT AACCTCTCTC AACCAGTAAG AGGAATAAAA CTAGAATTGC TGCTTGCTAC TATTAACAGA GAATGTCGTG ATTCCCAGTT TCTGCTATTA ACTCCTTTTA TTAATAACGC TACACAAATA TCTAAATGGC TTTCTTCCGA TAGTAACAAA TCGATTGAGA TGAGTGTGGA TTGGAACCCA AATGATAGAG CTATAGCACT AAGTCGCCAT AAAAAAAGTA ATAACGGTAA CTATTCCTTA TATCTTGAAA CTCTTCACAC AACAAGAAAT ACACTACATA TCCCTGAAAA ACTACAGTTA AGTAACAATC GTCCACTTGG ATATAATTGG TCACAAATAA ATAATAACGC TAGTAAACTA GCCGCAGTAA CTGCACAAGT TTTGAAAGAA AGAGGATCTG TTATAGTCTT GGTGGGAAAA ATTCAACATA CATGGTCACT CGCAAATAGT TTTAAACACC CTGATAATAA GATTACGGAT TTACCTGAAG ATGTGAAACT TGTAAAACGT TATATTCAAA GTGAATTTGG TGATGATTTC CCATTATGTG ATTTGCTGGA ATATGGAATT GGTGTGCATC ACTCTGGTCT GTCGGATGAA ACTAAATGGT TAATGGAATG GTTATTTGAA TCAGGACATA TTAAAATTCT TGTTGCAACT ACAACGATTG CTCAAGGAGT AAATTTTCCC GTAACAGCTG TAGTTATGGC TGACTATAGA TATCCATATG GTAAAGAAAT GCAACCAGAA GAATTTTGGA ATTTAGTTGG CCGAGCAGGG AGAGTAGATC AAGGGAGCGT AGGAATTGTT GCATTAGCTG CGACGAATGA AAAAAATGCT GTAAAGTTAA AGACGTTTGT TGATAAACAA GTTTTGTCTC TAAATTCAAC ACTTATAAAA ATGGTAGAAA CAGCTATAAG TGAAGGACAA ATTTTAGAAT TACAAAAATT GTCCTATCTC CCAGAATGGT CGGCTTTTTT GCAATACATA GTTCATTCAT ATCGTCAAAT TGGAAATTCT ACTGAATTTA CCAAGCAAAT TGAGTTAATT TTACGGGGTA CTTTAGGGTT TGAAACATTA AGAAATAATA ATCCTGATAA TGCTAGATAT CTTATTGCTG GAGTTAGAGC ATATGCTGAT AATTTATCGG GAAATGCTCC ACTTAAGTTG GTTGATAGTA CTGGTTTTTC GTTAGAAACA ATAAGAAATA CTTTAAAAAG ACTGCGTGAC GAACGTATTG GAGAAAATAT ATGGGATCCA AATGAATTAT TTAAAGATAA AAAAGATTTG AGGAAGCTGA TGGGGATATT GTTAGATGTT TCCGAATTAC GTGAAAATTT AGAAGCTGCT ACTGGTGGTT GGGGGAAAGA TGGAAGTCGT TTAGCAGATA TGGTCACTGA TTGGGTAAAT GGACTTAGCC TGAAAGAAAT GTCTGACAAA TATTTTGCTA ACGACAAGCA AGGAAATGCT ATTGATTCCA CAAAAGCTAT GAGTAATTGT TGTAGAAATA TTTTTGGAAA ACTTACACAA ACCGCCGCAT GGGGCCTCGC TGCTTTACAA ACAATGACTT TTGGAGATAA TTTCGATAAA TTATCTGAAA CAGACCAAGC AACACTTCGA AATTTGCCTG CAAGAGTTTA TTATGGCGTA GACACAGATG AAGCAATTGC ACTTCGTTTA TTAGGAGTGC CACGCAGTGC ATCACTTAGC TTGTCAAAAA ACATGTTTTC AGTAATACAT GAAAAATCTT TGAATGATTT GCGTACAGAA TTAGCAAGCC ATGATTCGAG ATTATGGACA GAATCAATGG GAAAAATTGG TGAGGATTAT TATAAGATTT GGAAGGTATT AGAAGGAATT GCCTAA
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Protein sequence | MKSWVMNLID DDSLKQAHIE SSRRLLHESL KLDYSSVEEE NSNFLLIIDS LELALIDLLD DDEQINSLRK ISAELFQLLR VLPKPEDPIE AGKEYLRLSC FGVLGDRGAD ASRLLRELPP IDLPINSPYW NKRTFATIID VWLSIIRKDG WNDLDRVHER VVDLRKHQNE YEKDYLESEG DYSRTAAWEL VALYHLAKAA ELLAIYTTQG QVEGNYDIRQ QLESQFDSAL NACTRAELVE LDNLTRLLEC TSQQLVDNCI WTITRAVNDQ VTQFVETLVS RERSKPIFEM LPPQRYTLRE EGLRSSSPRS IVINLPTSSG KTFIAEFRIL QALNQFENGW IAYLAPTHAL VNQICTRLRK DFNPLKINVE KISPALEIDS LEAGLLTDVE KSSYFRVLVT TPEKLDLMLR GGWEQKINRP LSLVIVDEAH NLSQPVRGIK LELLLATINR ECRDSQFLLL TPFINNATQI SKWLSSDSNK SIEMSVDWNP NDRAIALSRH KKSNNGNYSL YLETLHTTRN TLHIPEKLQL SNNRPLGYNW SQINNNASKL AAVTAQVLKE RGSVIVLVGK IQHTWSLANS FKHPDNKITD LPEDVKLVKR YIQSEFGDDF PLCDLLEYGI GVHHSGLSDE TKWLMEWLFE SGHIKILVAT TTIAQGVNFP VTAVVMADYR YPYGKEMQPE EFWNLVGRAG RVDQGSVGIV ALAATNEKNA VKLKTFVDKQ VLSLNSTLIK MVETAISEGQ ILELQKLSYL PEWSAFLQYI VHSYRQIGNS TEFTKQIELI LRGTLGFETL RNNNPDNARY LIAGVRAYAD NLSGNAPLKL VDSTGFSLET IRNTLKRLRD ERIGENIWDP NELFKDKKDL RKLMGILLDV SELRENLEAA TGGWGKDGSR LADMVTDWVN GLSLKEMSDK YFANDKQGNA IDSTKAMSNC CRNIFGKLTQ TAAWGLAALQ TMTFGDNFDK LSETDQATLR NLPARVYYGV DTDEAIALRL LGVPRSASLS LSKNMFSVIH EKSLNDLRTE LASHDSRLWT ESMGKIGEDY YKIWKVLEGI A
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