Gene Mbar_A0715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0715 
Symbol 
ID3625860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp861008 
End bp862075 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content43% 
IMG OID637699607 
Productcitrate synthase 
Protein accessionYP_304273 
Protein GI73668258 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01800] 2-methylcitrate synthase/citrate synthase II 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAA ATATCTGTTT CATCGATGGG TTGGAGGGCA TTCTGAAATA CAGGGAGATA 
GACATTAACC AGCTGGTTGA TCTTCCCTAT GATGCCGTTT CCTATCTGCT TATCCTCGGA
GATCTCCCCG GAGATCAGGA ACTTGCCGAG TATTCAGCCT GCTTGCATGG GGAGCGTGAA
GTCAACAGGG AGGTGATAGA TGTTATCCAT ATGTGCAATT TCAACATTGA CTCTATAGAA
GCGCTGCGTA CAATTGTTTC TTTTATATCA CAATTCGATC CGGACATCAA CGACAGCTCT
CCTGAAGGAA ACATGAGAAA GGCCACAAGG TTAATTGCCA AGATACCAAC CATAGTTGCT
GCGTATTATA GAATCGCAAA CGGAAAAGAA CCTGTACCTC CGGATCCATC CCTATCACAC
GGAGCTAACT TCCTGTATAT GTTAAGAGGA AACAAACCAA CTCAGTTGGA GGCTGAGGTC
ATGGAAAAAG ACTTCATCCT CAGCGCCGAA CATGAACTAA ATGCCTCTAC TTTTTCTTCA
AGAGTTACCG CCTCTACTCT TTCAGATCTC TATTCTGCTG TTGTTTCCGG ACTCTGCACC
CTTAAAGGCC CTCTACATGG AGGGGCAAGG GCAGAAGTCA CAGCCATGAT CGAAGAGATT
GCTTGCCCAG AAAATGCGGA GAATTATGTC CTTGATAAGC TGAGTAAAAA AGAAAAAATT
ATGGGCTTTG GACATAGAGT TTACAAAACT TACGATCCTA GAGGCATGAT ATTCAAGCAG
CTTGCTAAAC AACTCGCAGA AGCAAAAGGA GATATGCACT GGTACAACAT TGCCGAGGTA
GTAGAAAACA CTGTTATCCG TGAACTTGTA GAAAAGAAAG GAAAGCCAAT CTATCCTAAT
GTTGATTTCT ATTCTGGAGT CATTTACAAA TATATGGATA TTCCCCCTCA ACTTGCAACA
TCAATCTTCG CAATCGGCAG GGTCTCAGGC TGGATAGCTC ACTGCTTTGA CCAGTACGAG
AAGAAAAAGA TCATAAGGCC CAGAGCTTTC ATGCTTGACG AATGCTAA
 
Protein sequence
MSKNICFIDG LEGILKYREI DINQLVDLPY DAVSYLLILG DLPGDQELAE YSACLHGERE 
VNREVIDVIH MCNFNIDSIE ALRTIVSFIS QFDPDINDSS PEGNMRKATR LIAKIPTIVA
AYYRIANGKE PVPPDPSLSH GANFLYMLRG NKPTQLEAEV MEKDFILSAE HELNASTFSS
RVTASTLSDL YSAVVSGLCT LKGPLHGGAR AEVTAMIEEI ACPENAENYV LDKLSKKEKI
MGFGHRVYKT YDPRGMIFKQ LAKQLAEAKG DMHWYNIAEV VENTVIRELV EKKGKPIYPN
VDFYSGVIYK YMDIPPQLAT SIFAIGRVSG WIAHCFDQYE KKKIIRPRAF MLDEC