| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0683 |
|---|
| Symbol | |
|---|
| ID | 3625636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 816919 |
|---|
| End bp | 818160 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637699576 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_304242 |
|---|
| Protein GI | 73668227 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1361] S-layer domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.383867 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.499356 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATGA TTAAGAAGAT TACTGTAGCA ACTATTTCTT CCTTGCTTTT GATTTCCTTG
CTTTTTGCAG TTCCTGCCTC TGCAGCTGTT GGGGGAGCCA ATCTAAAAGT TACAATAGTC
GAAACAAATC CCTATCCTGC AAAAATAGGA GAATACCTGA CTTTAACTGT CCAGGTGGAA
AACATCGGCG GGGATAAAGC TGACAATGTT GACATCGAAG TTGTACCTCA ATATCCTTTC
TCTCTTGATT CAGAGACAAA TGCCCTACAG AATGTTGGAG TCCTCAGTCC TGGCAGGACT
GCTACAAAGG AATTTTACCT TTTTGTAGAC AAAAATGCGC AGAAAGGAGT ACGTTCCATT
GACATCAGAA CAAAAACCGG TAAAAACAGC CCCTGGAGTG AGAAAAGCTT TGACATACGA
ATAGGCACTG AAACATTTAA CAGCAAAGGT ACAGTTGAAC TTAAGGAATT TGTTTCGGAC
CCAGAGGTTT TCATGCCCGG AGACAGAGGT ACTGTCACTG TAACTCTGAA GAATACTGCA
AGTAATCCTA CTGTCACTAT TGATGGAAGC GACTTTGATA CAAATGCTCG AATTCAGGCT
GCGGTTTTGA GACCTTTATC TGATGGGATT ATCGTTCTTG ATGCTCCTTA CGGAGATATG
GGCCTTCTGG GACCAGGAGA TAGCATCAAA CTGACTTTTA ATGTTAAAGT TGCAGAAGAC
ACTCCAGAAG GGACTCACAA CTTTGAACTT GCAATAGAGG GAAACTCCTT CGATTACAAC
AGCAGAAAGA ATATTCCTCT CAAGGTAGAT TCTTCAAACA TAAGAGTGAT TCCTTCAAAA
GAACTTCAAC TGACAAATGG TGAATCTACA ATTGAGTTCG ATGTAGCGAA CACTCATCCT
AATGAGTTTA GCTCGGTTAG TATAAAACCT GAGGCTGAGG GCATCACCTT CTACCCTGCA
GAATATTTCA TAGGGCCAAT GAATCCGGAC GAACTTTTTA CGATTGAATT TAATGCCGTT
GCAGACGATC CATGGGGTGC CAGTAAGGAA GGGGGGATAA ACATGAGCCT CACTGCAAAC
TACAACAACG GAATCAACAG ACACGCAAAT ACTGTAGGAG ACCTGAAATT TATAAACACT
TTAGAGTCAC CCGAGTCTAA TTCAACAGCC GTACTGGCAG GGGGACTTAT TATAATCTCT
GTTCCTGCAG CTTTCTTGTT CTACAGAAGA AGAAAACAAT AA
|
|---|
| Protein sequence | MEMIKKITVA TISSLLLISL LFAVPASAAV GGANLKVTIV ETNPYPAKIG EYLTLTVQVE
NIGGDKADNV DIEVVPQYPF SLDSETNALQ NVGVLSPGRT ATKEFYLFVD KNAQKGVRSI
DIRTKTGKNS PWSEKSFDIR IGTETFNSKG TVELKEFVSD PEVFMPGDRG TVTVTLKNTA
SNPTVTIDGS DFDTNARIQA AVLRPLSDGI IVLDAPYGDM GLLGPGDSIK LTFNVKVAED
TPEGTHNFEL AIEGNSFDYN SRKNIPLKVD SSNIRVIPSK ELQLTNGEST IEFDVANTHP
NEFSSVSIKP EAEGITFYPA EYFIGPMNPD ELFTIEFNAV ADDPWGASKE GGINMSLTAN
YNNGINRHAN TVGDLKFINT LESPESNSTA VLAGGLIIIS VPAAFLFYRR RKQ
|
|---|
| |