| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0614 |
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| Symbol | rpl1P |
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| ID | 3627674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 737327 |
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| End bp | 737968 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637699507 |
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| Product | 50S ribosomal protein L1P |
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| Protein accession | YP_304174 |
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| Protein GI | 73668159 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0481513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGAAA AAAGTATACT GGAAGCTGTC AAGAAAGTAC TTGAAGAATC GCCAAAACGC
AATTTCTCTG AAAGTGTAGA TCTGGCAATT AACTTGAAGA ATCTTGACAT GAACCTACCA
AAGAACAGAG TCGATGAAGA AGTAATTCTT CCTCACGGGC TTGGAAAAGA ACTGAAGATC
GGTGTTTTTG CAAAAGGTGA TGTGGGCCTC AGAGCAAAGG CTGCCGGTGC TGCGTATGTT
ATTTCTGATG TTGAGCTCGA TGAACTGGCG TCTGATAAAA CCCGAGCCAG GACTCTTGCA
AACGAATGTG ACCTTTTTAT TGCAGAAACC CAGTTTATGC CAACAATTGG TAAGAACCTG
GGTATTGTTC TTGGACCTAG AGGGAAAATG CCTATCCCGC TTTTACCTAA CAAAGATATA
GGCGAACTTA TCCAGAGCAA GCAAAATGCA ATCAGATTGA GGTCAAAAGA CAAGCTCACT
TTCCATGTGC CTGTCGGCCG AAGGACTATG AGTCCCGATG ATCTTGCCGA AAACGTTGAG
ATTATAGTGT CCAGGCTGGA GCGTGTCCTG GATAAAGGCA GGCACAACCT GAGAACAGTC
TATGTCACGA CAACTATGGG AAAATCCGAA AGGGTGGTGT AA
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| Protein sequence | MAEKSILEAV KKVLEESPKR NFSESVDLAI NLKNLDMNLP KNRVDEEVIL PHGLGKELKI
GVFAKGDVGL RAKAAGAAYV ISDVELDELA SDKTRARTLA NECDLFIAET QFMPTIGKNL
GIVLGPRGKM PIPLLPNKDI GELIQSKQNA IRLRSKDKLT FHVPVGRRTM SPDDLAENVE
IIVSRLERVL DKGRHNLRTV YVTTTMGKSE RVV
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