Gene Mbar_A0593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0593 
Symbol 
ID3627999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp714023 
End bp715042 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content42% 
IMG OID637699486 
Productcondensin subunit ScpA 
Protein accessionYP_304153 
Protein GI73668138 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGC TTATGGATAA CGAGGAGGCA GTGCTTGAAG TTCCTCGTCT TCAAGCTAGT 
ACGGTTTCTG AATCCGGGGA AAACAATTCT CTTTTTGTTA AATCTGAAAT TTATGGGCTG
CCAGGTACTC TTTCATGCCT TGGAATTGAT TGGAACTTGC TTGATATTTC GGAGTTTGAG
ACTTCCGAAC CTCTGGGCAT ACTGGTTGAA CTTGCGCGGG TAGGAAAAAT AGATCCCTGG
GATATAGACA TAGTACAGCT TACTGACGGT TTCCTGAGAA AGGTGGAAGA GCTCAAGCAG
ATGGACCTTA GAATTTCTTC AAGGACACTT CTTTATTCTG CTATTCTCCT GCGCATGAAA
TCTTCTGGAA TCCTTGATGT GGAAGAGGAA GAGATTGATA CATTTGATTC GGATTTTCAT
GATGATCCAG ATTTCCCTGA GCCTGCAGAA TTCCCTATCC CGAAGCTTCC AGTTCGTCGT
GTATCCACAA GGCCGGTAAC ACTCAATGAA CTGATTATTG AACTCAAGAA AGCCGAAAAA
TGCCTCTCAA GAAAAAATGA AAAAAAAGCC AGACAGGTGT CAGAAGAATC CAATCCTCGC
CCTAAGCTTA CTACCGGAGA TGTCCTTGGC ATTGCACATG AAGAAGCCAT CAGCTCGCGA
TTGACCCTGA TGTGGGAAAG GCTTGCCGAA CTATTTACGA AGCAATCTGT AGTGGTTTTT
TCGAGTATAC TGGAGAGAAG CGAAGACAGA ATTATGGATT ATCTTTCTCT TCTTTTCCTT
GCCTCAAGCA GGAAAATCTG GCTTTTCCAG AATGAACTTT TTGAAGAATT ATACATATAT
CCAGGAGAAG AATCCGGCTT TTCCACAGAA GCAAATCCAT CCCTTTTCCA TGAGATGCTA
ATAAAATCAA AAACTGAAAT TTCTAAGCCT GAAACTAAAG GTTATTCAGG AATTGACTCA
ATAGGGGAAA TTCCTCCGCA TGAAAACATG GATGAAGAGC CTGAGTTAAC CGTACATTGA
 
Protein sequence
MAELMDNEEA VLEVPRLQAS TVSESGENNS LFVKSEIYGL PGTLSCLGID WNLLDISEFE 
TSEPLGILVE LARVGKIDPW DIDIVQLTDG FLRKVEELKQ MDLRISSRTL LYSAILLRMK
SSGILDVEEE EIDTFDSDFH DDPDFPEPAE FPIPKLPVRR VSTRPVTLNE LIIELKKAEK
CLSRKNEKKA RQVSEESNPR PKLTTGDVLG IAHEEAISSR LTLMWERLAE LFTKQSVVVF
SSILERSEDR IMDYLSLLFL ASSRKIWLFQ NELFEELYIY PGEESGFSTE ANPSLFHEML
IKSKTEISKP ETKGYSGIDS IGEIPPHENM DEEPELTVH