| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0542 |
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| Symbol | |
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| ID | 3627101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 646230 |
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| End bp | 647414 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637699434 |
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| Product | signal peptide peptidase A |
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| Protein accession | YP_304103 |
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| Protein GI | 73668088 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.99836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATA AAACCATAAA CCCTGAAGAC ACGAACTCAA AAGATCTATC TGGAGATAAC
AACTTACAAA GTAGCCCTCA CAACGGAAGA GATGACTCTG TCCCTGATAG TGGAACTTAC
GGTACGAGTG ATAACTCCTT TGACAGCTCT GCTCCTGGTG GTCCGGAAAA AATGGCTGAT
CATGGGACCC ACGTTGAGGT CTCTGAAAAT AAAGAAATTA AAAACAAGAG TTTAAGCATG
AATCCCAATC CGTATCCACA GAAAAATAAG CATAGATGGA TGCCCTACTT GCTGGTCTTA
CTGGCTCTCA TTACTATCAT ACTGGTGAGT CTTGTGTTAA TCTCCTCCAA TTTTGGTGTT
GGTGGAAACT TGGGAAGTTC GGAGAAGGTA GCTGTTATCT ATATCCAGGG TACTATCTTT
TCCGGAAACG TTGCTGAAGG GCTTGGTTAT GCTACTTCAG AAGCGATTGC AGGAGATATC
CGCAGGGCTG CTGCAGATGA TGGAGTCAAG GCAATTGTGC TTAGAATTGA CAGTTCTGGA
GGATCCCCAG CAGCAGCCCA AGAAATTGTA GAAGAAATTA AGAAAGCCCA GGCAAAAGGA
ATTCCTGTTG TTGTATCCAT GGGGGACCTT GCAGCCAGTG CTGCATATTA TATCTCTGCA
CCGACTGATT ACATTATTGC AAACCCCTCT ACGAATACCG GATCCATTGG AGTGATCTGG
GTCTTCCAGA ATAATTCTCT CTCTAATGAA GAAACAGGTG TAGATTACTA TGTTGCAAAA
TCTGGAGAAA TGAAAGACAT GGGAAGTACC TGGAGAGGAC TTACTGATCA GGAAAAAGAG
TATGCTGATT CTGTAGTTAT GGATAGCTAC GAAAATTTCG TAACTGAAGT TTCTGAAGGG
CGCAACATGT CCAGAGGTGA AGTCAAAGCC CTTGCTGATG GCCGCATATA CACCGGAACC
AGGGCAAAGG AACTTGGGCT TGTGGATGGC TTTGGAAATA TTTATGATGC AATTGACAAG
GCTGCTGAAC TTGGAGGAAT TTCAGGGGAA CCCAAAGTTG AATATATGAA TAAAGCAAGT
CTTTCAAGGC TACTTTTAGG TTCGGATTCC AAAGTATCTA ATGAGACAGC CAAACAGTCT
GTCAGTTACT TTGAAGAAAG TCCATATGGG AAACTTCTTG CCTGA
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| Protein sequence | MSDKTINPED TNSKDLSGDN NLQSSPHNGR DDSVPDSGTY GTSDNSFDSS APGGPEKMAD
HGTHVEVSEN KEIKNKSLSM NPNPYPQKNK HRWMPYLLVL LALITIILVS LVLISSNFGV
GGNLGSSEKV AVIYIQGTIF SGNVAEGLGY ATSEAIAGDI RRAAADDGVK AIVLRIDSSG
GSPAAAQEIV EEIKKAQAKG IPVVVSMGDL AASAAYYISA PTDYIIANPS TNTGSIGVIW
VFQNNSLSNE ETGVDYYVAK SGEMKDMGST WRGLTDQEKE YADSVVMDSY ENFVTEVSEG
RNMSRGEVKA LADGRIYTGT RAKELGLVDG FGNIYDAIDK AAELGGISGE PKVEYMNKAS
LSRLLLGSDS KVSNETAKQS VSYFEESPYG KLLA
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