Gene Maqu_3978 details

Gene Information

• Locus tag: Maqu_3978
• ID: 4653459
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Marinobacter aquaeolei VT8
• Kingdom: Bacteria
• Replicon accession: NC_008739
• Strand: +
• Start bp: 78636
• End bp: 79295
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 639809830
• Product: transposase IS66
• Protein accession: YP_957169
• Protein GI: 120537112
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3436] Transposase and inactivated derivatives

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.227501
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTGCGGG AGCAGTTGGG CGCTCAGGCG GAGGCCATTC GCCAGCTGAC CCATCAGTTG 
GACTGGTTCA AGAAACAGCT GTTCGGTCCC AAATCCGAGA AGCAGGTGTA TGACCTGCCA 
GGACAGGACA GCTTGTTCCA GCCCGATGAA GCACCGCTGC CGGAGCAGCC TGATGATGCA 
GAAAAACGCA CCATTAAGGC CTATCAGCGC GGCACCGGCA AGAAGCAGCG GGACGACGAC 
TGCCTGAACG ACACCGGACT GCGCTTTACC GCCGATGTGC CGGTAGAAGT CATTGAACAC 
CTGCCACCGG AGCTGACCGG CCCAGAGGCC GATCAGTACG AAGTGATCGG CAGCAAGACC 
ACCTACCGGC TGGCCCAGCG GGCCTCCAGC TATGTGGTGC TTAAGTGCGA ACGCCCGGTG 
TTCCGGCGCA AGGGCACCGA GAAGCTCATC ACGACACCGG CTCCGTTCAA CGTGCTGGAC 
AACAGCCTGG CCGATGTCAG CCTGCTGGCC GGGTTGCTGG TGGACAAGTT CCAGTTCCAC 
CTGCCGCTGT ATCGCCAGCA CCAGCGCATT CAACAAGCGG GTATTACCCT CAGCCGCAGC 
ACCCTGACCA ACCTGGTCAA GCGCGCCATC GACGGGGAGC CCGCAGAATT CGGAAAATAA 

 

Protein sequence

MLREQLGAQA EAIRQLTHQL DWFKKQLFGP KSEKQVYDLP GQDSLFQPDE APLPEQPDDA 
EKRTIKAYQR GTGKKQRDDD CLNDTGLRFT ADVPVEVIEH LPPELTGPEA DQYEVIGSKT 
TYRLAQRASS YVVLKCERPV FRRKGTEKLI TTPAPFNVLD NSLADVSLLA GLLVDKFQFH 
LPLYRQHQRI QQAGITLSRS TLTNLVKRAI DGEPAEFGK