| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_3000 |
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| Symbol | |
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| ID | 4654936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | - |
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| Start bp | 3325998 |
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| End bp | 3327602 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639812980 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_960261 |
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| Protein GI | 120555910 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.825647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATTC ACCGATTGCT CGCCAGGATG GTATTGGCTG TCTGTCTGGC CCTAGGGGCC
ACACTGGCGA ATGCCCAGGC GCAGACGAAT GCGCCCGAAG CGCTGCTGAA ACGGCTCGTA
GAAGCCGGGC AAGCTGAAAA AACCGACTTA CTCAAAGCCC TCTCCGAAAC CGGCGACGAA
CGCGCCCGGG GCTGGCTGGA AGCCGTTCGC GACGGCAAAC TCGCGGTGAT TGAAGACACC
GGTGCCCTGG TAATTGTGGT TAATAACCGG GGCCGTAACT GGCAGATCGC CGACGCCCTG
ACCGGCGAAG ACCTGGGTGA AATGTCGCGC CGGGATCTGC AAAGCCTGCG GGTGAACAAT
GCCCTGCGGG CCGACATCGA GGGCATCCTC TCGGTGATCG ACCTGACCGT GGCCGACCCT
GGCCAACGCC TTGATGCCGC GCGCAATCTG CTGGGCGAAG TGAATGAAGC GCTGGCCACC
CAGCTCCAGG CCCGTTTGCA GGTGGAAGAC AACGGCCAGG TGCGTGACAT GCTCACCAAT
GCCCTGGCCA TTTATCAGGT GGAGCAGGGC GATGTTGAGG CGGTAGCCAC TTTGTCCGGC
AGCCTGAACC CGACCGTGCG CGCCGCCCTG AATAATGCCG TTAACAGCGA TGACCCTGCG
CTGGCGGCTG CGGCCGAGGA AGCCCTGGCC AGCATTGAAC AGAAACTCAA ACTCAACCGC
GCTGCCGAGA CCCTGTATTT TGGCCTCTCC CTCGGCTCGG TACTGGTGCT GGCCGCCATT
GGCCTGGCCA TCACGTTTGG TGTGATGGGC GTGATCAACA TGGCCCATGG CGAGCTGATC
ATGCTCGGTG CCTACACCAC CTGGGGTATG CAGCAGCTGT TCCCGGGCCA GCCCGGCCTG
GCCCTGATCC TGTCCATCCC GGCCGGTTTC CTGGTGGCGG CGCTGGCGGG CATCGCCATT
GAGCGCAGCG TGATCCAGTA CCTGAAAGGC CGCCCGCTGG AAACCCTGCT GGCCACCTTC
GGCATCAGCC TGATTCTTCA GCAACTGGTG CGTACGGTGA TTTCCCCCCT CAACCGCACC
GTGGTCACGC CCGAGTGGAT GAGCGGCTCA ATCATGGTGA ACGAGGCGTT GTCGCTCACC
CTGAATCGCC TGTACGTGAT CGGCTTTGCC CTGGTGGTAT TCGCCGGGCT GATGCTGATC
ATGCGCAAGA CCCGCCTGGG GCTGGAAGTC CGTGCTGTTA CCCAGAACCG CGCTATGGCT
CGCTCCATGG GCATCAAGGC CACCAAAGTG GACATCATGA CTTTTGCCCT GGGCTCCGGC
GTTGCCGGGC TGGCGGGCGT GGCCCTGTCG CAGATCACCA ACGTCGGCCC CAACCTGGGC
CAGAACTACA TCATCGATTC GTTCATGGTG GTGGTGTTCG GTGGTGTGGG CAATCTCTGG
GGCACCCTCA TTGCCGGGCT TTCCCTGGGT ACCATCAACC AGCTGCTGGA ACCCTGGGCG
GGGGCGGTCC TCGCCAAAAT CATGGTGCTG GTGCTGATCA TCCTGTTCAT TCAAAAGCGG
CCACGCGGGC TATTCCCGCA GAAAGGCCGT GCGGCGGAGG GCTGA
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| Protein sequence | MSIHRLLARM VLAVCLALGA TLANAQAQTN APEALLKRLV EAGQAEKTDL LKALSETGDE
RARGWLEAVR DGKLAVIEDT GALVIVVNNR GRNWQIADAL TGEDLGEMSR RDLQSLRVNN
ALRADIEGIL SVIDLTVADP GQRLDAARNL LGEVNEALAT QLQARLQVED NGQVRDMLTN
ALAIYQVEQG DVEAVATLSG SLNPTVRAAL NNAVNSDDPA LAAAAEEALA SIEQKLKLNR
AAETLYFGLS LGSVLVLAAI GLAITFGVMG VINMAHGELI MLGAYTTWGM QQLFPGQPGL
ALILSIPAGF LVAALAGIAI ERSVIQYLKG RPLETLLATF GISLILQQLV RTVISPLNRT
VVTPEWMSGS IMVNEALSLT LNRLYVIGFA LVVFAGLMLI MRKTRLGLEV RAVTQNRAMA
RSMGIKATKV DIMTFALGSG VAGLAGVALS QITNVGPNLG QNYIIDSFMV VVFGGVGNLW
GTLIAGLSLG TINQLLEPWA GAVLAKIMVL VLIILFIQKR PRGLFPQKGR AAEG
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