| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1949 |
|---|
| Symbol | |
|---|
| ID | 4656483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 2177781 |
|---|
| End bp | 2179619 |
|---|
| Gene Length | 1839 bp |
|---|
| Protein Length | 612 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639811920 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_959217 |
|---|
| Protein GI | 120554866 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.931925 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACT TCCATTTTCT GCGCCCCTTG TGGTTAATTC TGTTACTGGC GGTTCCAGTC
CTGTTTCTGG CCCGACATCA ACTTCGCCAG GGTGAGACCG GATGGGCCCG ATACATCCCC
GCTCACCTGT TACAGCCCTT GATTCGTTCC CGAACCAACG AGACCACTGG CACCACCCGA
TCGCCCCTGT TGCCCCTGAG TCTGGCTCTG GTTTTGCTCG CAATTGCCCT CGCCGGGCCA
AGCTGGCGAC AGGCCCCCAC CCCCCTGAAA CAAACCCAGG ACAGCCTGGT CATTCTTCTG
GATCTGTCGC TTTCGATGCT GGCCACCGAC GTAGAACCAG ACAGGCTGAC GCTGGCCAAG
CGCAAGGTCC GCGACATCCT CGCGCAGCGA CAAGGCGGTT TGACGGCGCT GGTGGTTTAC
TCCGGCGACG CCCACACGGT AACGCCACTT ACCGGCGACA CCCGCACCAT CGAGGCCATG
CTCAGCGTGC TGGACCCCAC CATCATGCCT GCCCAGGGCA ACCGCGCCGA TCTGGCCGTG
CGTCAGGCAG TCGACCTGCT GGACCAGGGC GCACCGGGCC AGGGTCGCAT ACTGCTGATC
TCCGAGGCGG TACCGGAACA GCAATACAGT GCAATCAGTC AGCAACTGGC AGATACTCCC
TACCCCCTGA ACACCTTGGT GGTGGGCACC CGCGAAGGCG GCCCCATTCC CCTGGCAAAG
CGCGGATTCA TTCGGGACAA CGGCAGGATT GTCATCAGCC AGGCCGAACC AGACTCCCTG
GCCCAACTGG CCAGCATCAA CGGCGGAACC AGCCACGAAC TGACGCTGGA TGACGGGGAT
ATTCGCGCCC TGGCCCTGGA GCCATCACAG ACCGACGAAT GGCAGAACGA ACAGGACGGC
ATGACCGTTA ATCGCTGGCA GGACGACGGC TACTGGCTGC TGTGGCTGGT GCTGCCGTTA
CTCATTCTGG GCTGGCGTCG GGGAGCCTTT GCCATTCTGG CCTTCGCGCT GATTCCGCTG
GCAGGCGCTC CGCGCCCGGT TCAGGCTCTG GACTGGGGCA GCCTGTGGCT GCGAGAAGAC
CAGCGTGGGC CAAATCTTAT CCAGCAGGAT CCGTCCAGGG CCGCTACCAT TCTGGAGCAG
CCGGGTTGGC GCGGCTCAGC GCTCTATCGC GATGGCCAGT ACAGTGACGC TGCGGAAGCC
TTTGCCAATC AACCGGGGGC CGCCGGCGAC TACAACCGGG GCAACGCCCT GGCCCGGGCC
GGCCAACTGG AACAGGCCAT TGACGCCTAT CAACAGGCAC TGGAACAGCA GCCGGATTTC
GAAGATGCGC GCTTCAACCA GCAACTGGTT GAGCAACTCC TGAACCAGCA ACAGAAGTCT
CAGGGCGAGG GAGAAGGCGA CAACAACCAG GAAAGCAACG ATCAGAATCC CGGACAGCAG
AATGGCTCCA GCAGCCAGGG CCAGGGCAAT GACAGCCAGG ACAGCGCCAG GCAGGATTCT
GCAAACAACA ATGGCGAGAA TCAGGATCCC CGGCCTGGCG AGCAACAGCA GCCCTCCGAG
AACGGCGAAA GTTCACAGGA TAACGCCGGA GAGACACAAC CAGAGGATGG CTCACAGGAG
CAACAGCGGA ATGCCCAGGC AGGCCCGGAC GGGCCTTCCG GAGAGCGCCA GAGTGGTGCC
AGTGCGCCCG CCGAAATATC AGAACAGCCC CTGAGCCAGG GCCAGGAACA GTGGCTGCGC
CGTATACCGG ACAACCCCGG CGGGTTACTG CAACGCAAGT TCCTGCAACA GTACCAACAA
CGACAGACAA CACCCGATGA GGGCGACACA CCATGGTAA
|
|---|
| Protein sequence | MADFHFLRPL WLILLLAVPV LFLARHQLRQ GETGWARYIP AHLLQPLIRS RTNETTGTTR
SPLLPLSLAL VLLAIALAGP SWRQAPTPLK QTQDSLVILL DLSLSMLATD VEPDRLTLAK
RKVRDILAQR QGGLTALVVY SGDAHTVTPL TGDTRTIEAM LSVLDPTIMP AQGNRADLAV
RQAVDLLDQG APGQGRILLI SEAVPEQQYS AISQQLADTP YPLNTLVVGT REGGPIPLAK
RGFIRDNGRI VISQAEPDSL AQLASINGGT SHELTLDDGD IRALALEPSQ TDEWQNEQDG
MTVNRWQDDG YWLLWLVLPL LILGWRRGAF AILAFALIPL AGAPRPVQAL DWGSLWLRED
QRGPNLIQQD PSRAATILEQ PGWRGSALYR DGQYSDAAEA FANQPGAAGD YNRGNALARA
GQLEQAIDAY QQALEQQPDF EDARFNQQLV EQLLNQQQKS QGEGEGDNNQ ESNDQNPGQQ
NGSSSQGQGN DSQDSARQDS ANNNGENQDP RPGEQQQPSE NGESSQDNAG ETQPEDGSQE
QQRNAQAGPD GPSGERQSGA SAPAEISEQP LSQGQEQWLR RIPDNPGGLL QRKFLQQYQQ
RQTTPDEGDT PW
|
|---|
| |