| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1008 |
|---|
| Symbol | |
|---|
| ID | 4656322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 1148951 |
|---|
| End bp | 1150417 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639810971 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_958288 |
|---|
| Protein GI | 120553937 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCTTT CCGTGCTTCG AACCCTGTAT GCGAGGCTGG CCATTGGTCT GTTCCTGCTG
CTGTTGGTGG TGGGCGGGCT ATTTACTTTG CTGAGTCTGG CCTCGGTCAG GGAGTATTCG
GCTGCCGTTA ACCAGCAACT GAACCGGAAT CTGGCGCAGA ATCTGGTTTC TGACCGAAAC
CTGGTCACCG ATGGCCAGTT GAATCGGGAT GCCCTGAAGC AGCTGTTCGA GCTGTATATG
ACGATCAATC CCAGCCTTGA GATTTACCTG TTGGATACCG ATGGGGCCAT TCTTGCCTAT
TCCGCCGATC CGGACCGAAT CAAGCGCAAT CGGGTATCCC TCGGACCAAT CCAGACACTG
CTCGAAAACC CGGACGCCTA TCCTCTGCCG GGGGACGACC CTCGTAGTCA CGATCGGCAA
AAAGTGTTCT CTGTAACCCC TGTTCCCTCG GCAATCGACC CTGCCGGCTA CCTTTATGTG
GTTCTGAGGG GCGAAGAATT CGACCTCGCG GAGAGCATGG TTCACAGCAA CCGGTTGTTG
CAGATGGGCG CAGGCGCCCT GGCGGTGAGC CTGCTCGTGG GGCTCCTGGC CGGGTTGGTA
TTCTTCCGAA TGTTAACGCG GCGGCTGTCC CGGCTGACTG AACGGGTGGA GTCGTTTGAA
AGGGAATTGT CCTCTGAGCA GAGTCCTCCA CTGGTCGAGA AGGGCGACGA CATTGATTAC
CTGGCCTCTC GGTTTGATCT CATGGCGCGC CGCATTGTGG CGCAGCTGGA TCTCCTGAAG
CACAAAGACG CCCAGCGTCG ACAGCTGGTT GCTCAGGTGT CTCACGATCT TCGAACACCG
CTGGCGTCCA TTCAGGGCTA CCTGGAAGCG CTGCGGATGA AGCATGAGAC CCTGGAAGCC
GAGGAGCGAG GCCGGTTCCT GGCGGTGGCC CTGTCAGAAA CACACCGGTT GGGCAGGCAG
GTTGAGGAGT TGTTCGAACT GGCCGCCCTG GATGCCCGTG AAAAACAGCC GGATATCGAG
CCGTTTGTCA TGGCTGAGTT GCTCTACGAC GTCGTTCAGA AGCATAGGCC TGCGGCAGAA
CGAGCTGGTG TTGAGCTCAC CATTTCGGCG ACAGAGACCG AGAGCGTGCT GGCGGATATC
GCGATGACAG AGCGGGTTCT GGACAATCTC ATCAGCAATG CCATCGACCA TTCTCCGCGG
AATACAAGAG TCATACTCAC GATGTCAGTA CGGGATGGTG GAGCAGAGAT CACTGTTGCT
GATGGTGGGC CTGGCATCCG CAAAGAAGAC CTTGGCCAGG TGTTTGACCC CTTCTACCAG
GCCGCCGGAG CCGAACGCAC CGGCCATGCA GGCCTGGGAC TGGCGATCGC CCAGCGCTTG
GTCGTCCTGC AGCAAGGCAG GCTCTCAGCG CACAATGCGA ACGGTGCTGT CTTTACCCTC
TGGCTACCGT TAGCTTCCTC CAGCTAG
|
|---|
| Protein sequence | MGLSVLRTLY ARLAIGLFLL LLVVGGLFTL LSLASVREYS AAVNQQLNRN LAQNLVSDRN
LVTDGQLNRD ALKQLFELYM TINPSLEIYL LDTDGAILAY SADPDRIKRN RVSLGPIQTL
LENPDAYPLP GDDPRSHDRQ KVFSVTPVPS AIDPAGYLYV VLRGEEFDLA ESMVHSNRLL
QMGAGALAVS LLVGLLAGLV FFRMLTRRLS RLTERVESFE RELSSEQSPP LVEKGDDIDY
LASRFDLMAR RIVAQLDLLK HKDAQRRQLV AQVSHDLRTP LASIQGYLEA LRMKHETLEA
EERGRFLAVA LSETHRLGRQ VEELFELAAL DAREKQPDIE PFVMAELLYD VVQKHRPAAE
RAGVELTISA TETESVLADI AMTERVLDNL ISNAIDHSPR NTRVILTMSV RDGGAEITVA
DGGPGIRKED LGQVFDPFYQ AAGAERTGHA GLGLAIAQRL VVLQQGRLSA HNANGAVFTL
WLPLASSS
|
|---|
| |